COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.9 nTPM
HPA:0.5 nTPM
GTEx:16.9 nTPM
FANTOM5:8.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 0.5
overview
Male, age 54 		Colon sample 67
nTPM: 0.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 1.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 0.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 0.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 16.9
Samples: 373

Max nTPM: 55.2
Min nTPM: 4.4
Std nTPM: 6.4
Median nTPM: 15.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 55.2
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 52.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 44.3
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 41.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 36.6
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 35.6
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 34.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 34.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 33.7
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 33.3
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 33.0
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Colon - Transverse
Average nTPM: 12.2
Samples: 406

Max nTPM: 32.7
Min nTPM: 3.5
Std nTPM: 5.4
Median nTPM: 11.0
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 32.7
GTEX-1KANB-1526-SM-CXZK4 50-59 years, male 32.1
GTEX-QMRM-1226-SM-447C6 50-59 years, male 30.8
GTEX-1AMEY-1926-SM-73KVT 30-39 years, female 30.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 30.1
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 28.7
GTEX-1HSEH-1726-SM-B2LXH 60-69 years, male 28.6
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 27.9
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 27.8
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 27.5
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 27.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 8.0
FF:10014-101C5 62,83,84 years, mixed 8.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.