HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:75.0 nTPM
HPA:75.0 nTPM
GTEx:59.7 nTPM
FANTOM5:110.7 Scaled Tags Per Million
Pig:58.6 nTPM
Mouse:241.2 nTPM
Allen mouse:16.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040282Antibody HPA063763
Glial cells Not detectedLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.0
Sample id Sample description nTPM
Hippocampus
nTPM: 73.6
1898 Male, age 80, left hemisphere 77.1
2621 Female, age 67, right hemisphere 76.5
2148 Female, age 91, left hemisphere 72.3
2529 Female, age 94, left hemisphere 72.1
1855 Male, age 76, left hemisphere 71.8
1911 Female, age 85, right hemisphere 71.5
Dentate gyrus
nTPM: 72.7
2010 Male, age 76, both hemispheres 76.4
2530 Female, age 94, left hemisphere 74.7
1927 Female, age 91, both hemispheres 74.3
2528 Male, age 74, both hemispheres 73.0
2246 Female, age 85, both hemispheres 71.0
2531 Female, age 67, both hemispheres 67.1
Entorhinal gyrus
nTPM: 72.0
2117 Female, age 91, right hemisphere 76.7
1938 Female, age 85, left hemisphere 73.6
2764 Male, age 80, right hemisphere 72.9
1787 Male, age 76, left hemisphere 72.0
2686 Male, age 75, right hemisphere 69.1
2613 Female, age 94, left hemisphere 68.0
Hippocampus, CA1
nTPM: 75.0
1873 Female, age 85, both hemispheres 79.5
2749 Male, age 80, left hemisphere 78.8
2527 Male, age 74, both hemispheres 76.5
2045 Male, age 76, both hemispheres 70.4
2082 Female, age 91, right hemisphere 69.6
Hippocampus, CA2
nTPM: 74.7
2249 Male, age 74, both hemispheres 79.1
1892 Male, age 76, both hemispheres 78.3
1963 Male, age 80, left hemisphere 78.1
2437 Female, age 94, left hemisphere 72.6
2113 Female, age 91, right hemisphere 70.3
1940 Female, age 85, left hemisphere 69.8
Hippocampus, CA3
nTPM: 73.3
2436 Male, age 74, both hemispheres 79.5
1867 Male, age 76, both hemispheres 75.4
1891 Female, age 85, both hemispheres 75.4
2137 Male, age 80, left hemisphere 72.2
2620 Female, age 94, left hemisphere 70.0
2861 Female, age 67, both hemispheres 67.0
Parahippocampal cortex
nTPM: 72.0
1850 Male, age 80, both hemispheres 77.4
1933 Female, age 85, both hemispheres 73.9
2692 Male, age 74, both hemispheres 73.2
1990 Female, age 91, right hemisphere 72.7
2250 Female, age 67, right hemisphere 72.7
2018 Male, age 76, both hemispheres 71.9
2245 Female, age 91, both hemispheres 70.7
2693 Female, age 94, both hemispheres 70.2
2532 Female, age 72, left hemisphere 70.0
2622 Female, age 67, right hemisphere 67.4
Perirhinal gyrus
nTPM: 72.4
1847 Female, age 91, left hemisphere 74.8
1841 Female, age 85, right hemisphere 74.3
1794 Male, age 80, right hemisphere 73.5
2848 Male, age 76, right hemisphere 70.3
2521 Female, age 94, right hemisphere 69.0
Subiculum
nTPM: 73.3
1901 Male, age 80, both hemispheres 78.4
2438 Female, age 94, left hemisphere 74.1
1977 Female, age 85, both hemispheres 72.5
2042 Male, age 76, both hemispheres 71.9
2729 Female, age 91, right hemisphere 71.6
2619 Male, age 74, both hemispheres 71.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.7
Samples: 197

Max nTPM: 95.5
Min nTPM: 34.8
Std nTPM: 9.7
Median nTPM: 59.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 95.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 81.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 81.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 80.1
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 77.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 76.6
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 76.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 76.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 74.8
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 74.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.7
FF:10169-103B7 60 years, female 132.8
FF:10153-102I9 76 years, female 88.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 79.9
Min nTPM: 43.0
Sample A Female 79.9
Sample B Female 59.5
Sample C Male 51.9
Sample D Male 43.0
Entorhinal cortex
nTPM: 49.2
Samples: 4

Max nTPM: 60.6
Min nTPM: 40.6
Sample A Female 60.6
Sample B Female 50.6
Sample C Male 44.9
Sample D Male 40.6
Subiculum
nTPM: 47.3
Samples: 4

Max nTPM: 62.3
Min nTPM: 40.2
Sample A Female 62.3
Sample B Female 41.5
Sample C Male 45.1
Sample D Male 40.2
Ventral hippocampus
nTPM: 55.2
Samples: 4

Max nTPM: 65.3
Min nTPM: 35.4
Sample A Female 62.9
Sample B Female 35.4
Sample C Male 65.3
Sample D Male 57.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 241.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 240.3
Samples: 4

Max nTPM: 247.6
Min nTPM: 234.8
Sample A Male 236.5
Sample B Male 234.8
Sample C Female 242.2
Sample D Female 247.6
Hippocampal formation
nTPM: 241.2
Samples: 4

Max nTPM: 272.2
Min nTPM: 226.4
Sample A Male 272.2
Sample B Male 226.4
Sample C Female 229.7
Sample D Female 236.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
71836805 Antisense, RP_051017_02_A10, Mouse strain C57BL/6J (56 days, male) 20.3
393213 Antisense, RP_040804_02_E01, Mouse strain C57BL/6J (56 days, male) 13.0

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