HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.3 nTPM
HPA:54.3 nTPM
GTEx:60.1 nTPM
FANTOM5:203.2 Scaled Tags Per Million
Pig:164.2 nTPM
Mouse:134.2 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065425Antibody CAB069426
Glial cells Not detectedLow
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 49.5
1898 Male, age 80, left hemisphere 66.1
2529 Female, age 94, left hemisphere 53.0
1911 Female, age 85, right hemisphere 48.2
2148 Female, age 91, left hemisphere 44.7
1855 Male, age 76, left hemisphere 43.6
2621 Female, age 67, right hemisphere 41.6
Dentate gyrus
nTPM: 51.3
2010 Male, age 76, both hemispheres 64.6
2246 Female, age 85, both hemispheres 51.9
2528 Male, age 74, both hemispheres 51.5
1927 Female, age 91, both hemispheres 51.0
2530 Female, age 94, left hemisphere 48.4
2531 Female, age 67, both hemispheres 40.3
Entorhinal gyrus
nTPM: 44.0
2117 Female, age 91, right hemisphere 56.2
1938 Female, age 85, left hemisphere 53.0
2764 Male, age 80, right hemisphere 47.6
1787 Male, age 76, left hemisphere 42.0
2686 Male, age 75, right hemisphere 39.3
2613 Female, age 94, left hemisphere 25.9
Hippocampus, CA1
nTPM: 54.3
1873 Female, age 85, both hemispheres 61.4
2749 Male, age 80, left hemisphere 58.2
2045 Male, age 76, both hemispheres 52.0
2527 Male, age 74, both hemispheres 51.6
2082 Female, age 91, right hemisphere 48.2
Hippocampus, CA2
nTPM: 51.4
2249 Male, age 74, both hemispheres 61.2
1940 Female, age 85, left hemisphere 53.0
1892 Male, age 76, both hemispheres 52.8
1963 Male, age 80, left hemisphere 51.8
2113 Female, age 91, right hemisphere 45.9
2437 Female, age 94, left hemisphere 43.6
Hippocampus, CA3
nTPM: 46.9
1891 Female, age 85, both hemispheres 58.0
1867 Male, age 76, both hemispheres 55.9
2137 Male, age 80, left hemisphere 52.9
2436 Male, age 74, both hemispheres 45.4
2861 Female, age 67, both hemispheres 37.1
2620 Female, age 94, left hemisphere 32.4
Parahippocampal cortex
nTPM: 46.9
1850 Male, age 80, both hemispheres 59.0
1933 Female, age 85, both hemispheres 54.2
2250 Female, age 67, right hemisphere 52.2
2018 Male, age 76, both hemispheres 50.5
1990 Female, age 91, right hemisphere 49.8
2245 Female, age 91, both hemispheres 45.0
2692 Male, age 74, both hemispheres 43.0
2693 Female, age 94, both hemispheres 42.1
2532 Female, age 72, left hemisphere 40.2
2622 Female, age 67, right hemisphere 33.5
Perirhinal gyrus
nTPM: 52.3
1794 Male, age 80, right hemisphere 59.9
1841 Female, age 85, right hemisphere 57.8
1847 Female, age 91, left hemisphere 51.3
2521 Female, age 94, right hemisphere 50.5
2848 Male, age 76, right hemisphere 42.2
Subiculum
nTPM: 48.0
1977 Female, age 85, both hemispheres 56.8
2729 Female, age 91, right hemisphere 51.3
2042 Male, age 76, both hemispheres 50.3
1901 Male, age 80, both hemispheres 48.9
2619 Male, age 74, both hemispheres 42.2
2438 Female, age 94, left hemisphere 38.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.1
Samples: 197

Max nTPM: 173.3
Min nTPM: 31.4
Std nTPM: 15.0
Median nTPM: 58.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 173.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 106.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 105.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 105.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 92.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 90.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 87.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 87.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 82.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 82.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 203.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 203.2
FF:10169-103B7 60 years, female 227.0
FF:10153-102I9 76 years, female 179.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 164.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 164.2
Samples: 4

Max nTPM: 187.7
Min nTPM: 136.7
Sample A Female 187.7
Sample B Female 165.8
Sample C Male 166.5
Sample D Male 136.7
Entorhinal cortex
nTPM: 138.0
Samples: 4

Max nTPM: 163.7
Min nTPM: 113.5
Sample A Female 127.7
Sample B Female 163.7
Sample C Male 147.1
Sample D Male 113.5
Subiculum
nTPM: 127.1
Samples: 4

Max nTPM: 149.1
Min nTPM: 117.4
Sample A Female 149.1
Sample B Female 122.5
Sample C Male 119.2
Sample D Male 117.4
Ventral hippocampus
nTPM: 132.8
Samples: 4

Max nTPM: 150.4
Min nTPM: 124.8
Sample A Female 128.6
Sample B Female 124.8
Sample C Male 127.2
Sample D Male 150.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 134.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 115.7
Samples: 4

Max nTPM: 120.4
Min nTPM: 112.3
Sample A Male 113.0
Sample B Male 120.4
Sample C Female 117.1
Sample D Female 112.3
Hippocampal formation
nTPM: 134.2
Samples: 4

Max nTPM: 140.8
Min nTPM: 120.8
Sample A Male 140.8
Sample B Male 135.7
Sample C Female 139.4
Sample D Female 120.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
69817205 Antisense, RP_050510_02_H04, Mouse strain C57BL/6J (56 days, male) 4.4

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