COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:60.3 nTPM
HPA:19.2 nTPM
GTEx:60.3 nTPM
FANTOM5:43.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 19.2
overview
Male, age 54 		Colon sample 67
nTPM: 18.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 23.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 21.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 36.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 19.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 16.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 9.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 17.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 23.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 27.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 60.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 60.3
Samples: 373

Max nTPM: 110.2
Min nTPM: 17.4
Std nTPM: 16.5
Median nTPM: 59.5
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 110.2
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 108.6
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 106.9
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 106.8
GTEX-1RMOY-1726-SM-EVYC9 50-59 years, male 104.6
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 103.2
GTEX-14BIN-2426-SM-5TDCF 50-59 years, female 100.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 99.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 98.8
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 98.6
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 97.3
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Colon - Transverse
Average nTPM: 45.9
Samples: 406

Max nTPM: 149.0
Min nTPM: 11.8
Std nTPM: 23.0
Median nTPM: 40.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 149.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 128.2
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 120.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 117.2
GTEX-1NV5F-2226-SM-DTX8O 60-69 years, female 113.0
GTEX-1LSVX-1726-SM-DHXJP 60-69 years, male 106.0
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 105.8
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 101.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 100.5
GTEX-1JJ6O-2426-SM-ARU8J 60-69 years, male 98.3
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 97.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 43.7
FF:10014-101C5 62,83,84 years, mixed 43.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.