HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:25.7 nTPM
HPA:25.7 nTPM
GTEx:19.4 nTPM
FANTOM5:35.6 Scaled Tags Per Million
Pig:0.5 nTPM
Mouse:2.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
2529 Female, age 94, left hemisphere 27.5
1911 Female, age 85, right hemisphere 26.1
2621 Female, age 67, right hemisphere 25.8
1898 Male, age 80, left hemisphere 25.5
2148 Female, age 91, left hemisphere 24.7
1855 Male, age 76, left hemisphere 24.6
Dentate gyrus
nTPM: 25.1
2531 Female, age 67, both hemispheres 25.8
2246 Female, age 85, both hemispheres 25.7
1927 Female, age 91, both hemispheres 25.3
2010 Male, age 76, both hemispheres 25.2
2530 Female, age 94, left hemisphere 24.5
2528 Male, age 74, both hemispheres 24.2
Entorhinal gyrus
nTPM: 25.2
2117 Female, age 91, right hemisphere 26.8
1787 Male, age 76, left hemisphere 25.7
2686 Male, age 75, right hemisphere 25.5
2764 Male, age 80, right hemisphere 24.9
1938 Female, age 85, left hemisphere 24.3
2613 Female, age 94, left hemisphere 23.7
Hippocampus, CA1
nTPM: 24.5
2045 Male, age 76, both hemispheres 25.2
2527 Male, age 74, both hemispheres 24.8
2082 Female, age 91, right hemisphere 24.5
1873 Female, age 85, both hemispheres 24.4
2749 Male, age 80, left hemisphere 23.4
Hippocampus, CA2
nTPM: 25.5
1940 Female, age 85, left hemisphere 26.3
2437 Female, age 94, left hemisphere 26.1
1892 Male, age 76, both hemispheres 25.8
2249 Male, age 74, both hemispheres 25.1
1963 Male, age 80, left hemisphere 24.8
2113 Female, age 91, right hemisphere 24.8
Hippocampus, CA3
nTPM: 25.1
1891 Female, age 85, both hemispheres 26.3
1867 Male, age 76, both hemispheres 25.2
2620 Female, age 94, left hemisphere 25.2
2436 Male, age 74, both hemispheres 25.0
2861 Female, age 67, both hemispheres 24.8
2137 Male, age 80, left hemisphere 23.8
Parahippocampal cortex
nTPM: 24.8
1850 Male, age 80, both hemispheres 26.2
2018 Male, age 76, both hemispheres 25.9
1933 Female, age 85, both hemispheres 25.1
2693 Female, age 94, both hemispheres 25.1
2250 Female, age 67, right hemisphere 25.0
2692 Male, age 74, both hemispheres 24.9
1990 Female, age 91, right hemisphere 24.7
2245 Female, age 91, both hemispheres 24.4
2622 Female, age 67, right hemisphere 23.6
2532 Female, age 72, left hemisphere 23.1
Perirhinal gyrus
nTPM: 24.8
1794 Male, age 80, right hemisphere 25.6
1847 Female, age 91, left hemisphere 25.0
1841 Female, age 85, right hemisphere 24.7
2848 Male, age 76, right hemisphere 24.4
2521 Female, age 94, right hemisphere 24.3
Subiculum
nTPM: 25.5
1901 Male, age 80, both hemispheres 26.0
2042 Male, age 76, both hemispheres 25.8
2438 Female, age 94, left hemisphere 25.8
1977 Female, age 85, both hemispheres 25.5
2729 Female, age 91, right hemisphere 24.9
2619 Male, age 74, both hemispheres 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 40.9
Min nTPM: 8.1
Std nTPM: 5.2
Median nTPM: 19.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 36.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 32.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 31.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 31.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 30.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 29.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.6
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 29.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.3
Sample C Male 1.3
Sample D Male 0.1
Entorhinal cortex
nTPM: 0.5
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.5
Sample D Male 1.2
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.0
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Female 0.6
Sample B Female 0.0
Sample C Male 0.6
Sample D Male 0.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.7
Sample A Male 1.7
Sample B Male 2.2
Sample C Female 2.8
Sample D Female 2.7
Hippocampal formation
nTPM: 2.1
Samples: 4

Max nTPM: 4.3
Min nTPM: 0.8
Sample A Male 0.8
Sample B Male 0.9
Sample C Female 4.3
Sample D Female 2.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71724478 Antisense, RP_050927_03_G03, Mouse strain C57BL/6J (56 days, male) 0.4

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