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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:40.6 nTPM
HPA:40.6 nTPM
GTEx:65.7 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:39.7 nTPM
Mouse:101.3 nTPM
Allen mouse:11.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB025629
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 40.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.9
2290 Female, age 72, unknown 37.1
2288 Male, age 75, left hemisphere 32.9
1857 Female, age 85, left hemisphere 31.7
1781 Male, age 74, unknown 29.7
2846 Female, age 79, unknown 29.7
2289 Male, age 61, right hemisphere 27.8
2481 Female, age 94, left hemisphere 25.5
1854 Male, age 80, left hemisphere 24.5
Claustrum
nTPM: 23.8
2491 Male, age 75, both hemispheres 30.2
2568 Male, age 61, both hemispheres 27.5
2284 Female, age 91, both hemispheres 27.1
2645 Female, age 72, unknown 26.5
2196 Female, age 79, unknown 23.4
2198 Male, age 80, both hemispheres 22.8
1956 Male, age 74, unknown 20.1
2292 Female, age 85, both hemispheres 18.4
2392 Female, age 94, both hemispheres 17.9
Globus pallidus, externus
nTPM: 38.6
2567 Female, age 72, unknown 46.8
2646 Male, age 61, right hemisphere 43.9
1996 Male, age 80, right hemisphere 37.4
2772 Female, age 79, unknown 37.3
2395 Male, age 75, both hemispheres 27.6
Globus pallidus, internus
nTPM: 34.3
2287 Male, age 75, right hemisphere 39.4
2566 Female, age 72, unknown 35.1
1818 Male, age 74, unknown 34.9
2111 Female, age 85, right hemisphere 34.1
2483 Female, age 94, right hemisphere 33.0
2778 Female, age 91, both hemispheres 32.9
2037 Male, age 80, right hemisphere 30.8
Nucleus accumbens
nTPM: 27.9
1806 Female, age 85, left hemisphere 33.6
2286 Male, age 75, left hemisphere 30.0
2732 Male, age 80, right hemisphere 28.6
1783 Male, age 74, unknown 28.1
2698 Female, age 72, unknown 27.4
1856 Female, age 91, right hemisphere 27.3
2824 Male, age 61, right hemisphere 25.9
2391 Female, age 94, left hemisphere 22.5
Nucleus basalis of Meynert
nTPM: 30.4
2569 Male, age 61, both hemispheres 46.9
2484 Female, age 94, left hemisphere 28.2
2393 Male, age 80, right hemisphere 24.4
2821 Male, age 75, both hemispheres 22.2
Nucleus of the diagonal band
nTPM: 36.4
1979 Male, age 74, unknown 41.4
2195 Female, age 85, both hemispheres 40.5
1812 Female, age 91, both hemispheres 34.9
2029 Male, age 61, right hemisphere 34.1
2775 Male, age 80, right hemisphere 31.2
Olfactory tubercle
nTPM: 31.7
2487 Female, age 94, left hemisphere 35.5
2856 Male, age 75, right hemisphere 33.6
1846 Male, age 80, right hemisphere 30.3
1998 Female, age 91, both hemispheres 27.4
Putamen
nTPM: 31.4
2489 Female, age 72, unknown 42.6
2647 Male, age 75, left hemisphere 39.9
2466 Female, age 79, unknown 33.2
1829 Male, age 74, unknown 32.5
1838 Male, age 80, right hemisphere 26.0
1937 Female, age 91, right hemisphere 23.7
2482 Female, age 94, left hemisphere 22.0
Septal nuclei
nTPM: 40.6
2059 Female, age 85, both hemispheres 49.1
2394 Male, age 61, left hemisphere 46.6
2199 Male, age 80, right hemisphere 44.9
1960 Male, age 74, unknown 43.3
2031 Female, age 72, unknown 37.7
2009 Female, age 91, both hemispheres 35.5
2629 Female, age 94, right hemisphere 27.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 65.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 60.2
Samples: 246

Max nTPM: 96.2
Min nTPM: 30.0
Std nTPM: 12.7
Median nTPM: 59.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 96.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 91.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 88.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 87.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 87.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 86.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 86.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 84.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 81.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 81.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 81.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 80.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 79.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 78.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 78.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 78.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 78.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 77.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 77.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 76.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 75.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 75.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 75.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 75.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 74.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 74.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 74.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 74.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 74.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 74.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 73.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 72.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 72.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 71.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 71.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 70.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 70.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 70.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 70.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 70.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 69.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 69.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 69.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 67.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 67.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 67.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 67.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 66.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 66.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 66.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 66.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 65.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 65.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 65.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 65.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 64.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 64.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 64.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 64.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 63.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 63.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 63.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 63.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 63.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 63.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 63.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 63.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 62.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 62.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 62.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 61.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 61.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 61.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 61.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 61.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 60.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 60.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 59.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 59.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 59.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 59.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 59.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 59.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 58.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 58.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 58.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 58.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 58.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 58.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 58.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 58.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 57.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 57.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 57.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 57.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 57.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 57.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 57.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 56.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 56.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 56.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 56.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 56.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 56.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 56.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 55.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 55.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 55.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 55.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 55.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 54.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 54.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 54.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 54.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 53.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 53.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 53.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 53.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 53.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 53.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 52.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 52.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 52.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 51.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 51.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 51.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 51.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 51.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 51.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 50.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 50.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 50.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 50.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 50.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 48.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 47.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 47.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 46.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 46.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 45.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 45.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 44.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 42.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 42.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 42.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 41.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 40.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 38.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 38.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 37.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 37.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 37.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 36.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 35.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 35.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 34.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 33.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 32.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 30.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 62.2
Samples: 246

Max nTPM: 109.6
Min nTPM: 27.5
Std nTPM: 13.2
Median nTPM: 61.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 109.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 96.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 94.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 91.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 91.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 90.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 88.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 87.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 86.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 84.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 84.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 83.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 82.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 82.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 81.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 81.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 81.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 81.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 80.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 80.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 80.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 79.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 79.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 79.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 78.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 78.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 78.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 78.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 78.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 77.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 77.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 77.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 77.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 76.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 76.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 76.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 75.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 74.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 74.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 73.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 73.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 73.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 73.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 73.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 73.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 72.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 72.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 72.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 71.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 71.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 71.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 71.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 71.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 71.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 70.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 70.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 70.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 70.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 70.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 70.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 69.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 69.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 69.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 69.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 69.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 68.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 68.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 68.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 68.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 68.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 68.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 67.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 67.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 67.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 67.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 67.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 66.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 66.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 66.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 66.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 66.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 66.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 66.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 65.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 65.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 65.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 65.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 65.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 65.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 65.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 64.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 64.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 64.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 64.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 63.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 63.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 63.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 63.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 63.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 63.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 63.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 63.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 62.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 62.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 62.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 62.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 62.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 62.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 62.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 62.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 62.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 62.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 62.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 61.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 61.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 61.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 61.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 61.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 61.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 61.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 60.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 60.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 60.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 60.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 60.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 60.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 60.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 59.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 59.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 59.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 59.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 59.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 59.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 58.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 58.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 57.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 57.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 57.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 57.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 57.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 57.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 57.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 57.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 57.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 57.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 56.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 56.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 56.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 56.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 56.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 56.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 56.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 55.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 55.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 55.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 55.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 55.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 55.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 55.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 55.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 55.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 55.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 54.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 54.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 54.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 54.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 54.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 54.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 53.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 53.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 53.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 53.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 52.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 52.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 52.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 52.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 52.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 52.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 52.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 52.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 51.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 51.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 51.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 51.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 51.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 51.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 50.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 49.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 49.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 48.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 48.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 47.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 47.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 47.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 46.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 46.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 46.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 46.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 46.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 45.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 44.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 44.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 44.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 43.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 42.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 42.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 41.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 41.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 41.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 41.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 40.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 40.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 40.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 36.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 36.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 34.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 32.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 31.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 30.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 27.5
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Brain - Putamen (basal ganglia)
Average nTPM: 65.7
Samples: 205

Max nTPM: 107.5
Min nTPM: 31.5
Std nTPM: 13.1
Median nTPM: 65.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 107.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 98.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 92.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 90.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 88.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 88.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 88.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 87.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 87.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 86.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 86.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 85.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 85.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 85.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 84.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 84.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 84.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 84.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 83.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 83.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 82.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 82.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 82.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 81.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 79.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 79.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 79.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 79.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 79.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 79.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 78.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 78.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 78.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 78.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 78.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 77.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 77.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 77.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 77.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 76.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 76.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 75.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 75.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 75.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 75.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 75.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 75.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 74.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 74.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 74.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 74.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 74.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 74.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 73.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 73.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 73.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 73.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 72.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 72.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 72.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 71.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 71.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 71.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 70.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 70.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 70.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 70.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 70.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 69.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 69.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 69.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 68.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 68.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 68.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 68.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 68.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 67.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 67.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 67.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 67.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 66.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 66.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 66.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 66.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 66.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 66.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 65.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 65.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 65.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 65.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 65.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 65.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 65.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 65.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 65.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 64.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 64.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 64.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 64.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 64.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 64.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 64.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 63.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 63.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 63.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 63.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 63.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 63.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 63.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 63.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 62.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 62.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 62.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 62.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 62.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 61.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 61.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 61.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 61.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 61.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 61.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 60.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 60.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 60.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 60.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 60.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 59.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 59.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 59.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 59.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 58.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 58.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 57.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 57.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 57.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 57.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 57.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 57.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 56.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 56.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 56.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 55.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 55.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 55.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 54.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 53.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 52.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 52.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 52.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 51.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 51.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 51.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 50.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 50.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 50.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 50.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 49.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 48.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 48.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 48.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 48.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 47.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 47.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 46.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 46.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 45.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 45.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 43.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 40.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 38.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 37.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 35.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 35.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 34.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 32.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 31.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 23.5
FF:10164-103B2 76 years, female 23.5
Globus pallidus
Scaled Tags Per Million: 14.6
FF:10175-103C4 60 years, female 14.9
FF:10161-103A8 76 years, female 14.2
Nucleus accumbens
Scaled Tags Per Million: 30.5
FF:10037-101F1 23-56 years, mixed 30.5
Putamen
Scaled Tags Per Million: 24.2
FF:10176-103C5 60 years, female 24.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 39.7
Pig sample Sample description nTPM
Caudate
nTPM: 39.7
Samples: 4

Max nTPM: 47.3
Min nTPM: 26.9
Sample A Female 26.9
Sample B Female 47.3
Sample C Male 46.4
Sample D Male 38.3
Putamen
nTPM: 33.4
Samples: 4

Max nTPM: 37.0
Min nTPM: 26.9
Sample A Female 26.9
Sample B Female 37.0
Sample C Male 34.4
Sample D Male 35.3
Septum
nTPM: 39.0
Samples: 4

Max nTPM: 47.6
Min nTPM: 32.8
Sample A Female 32.8
Sample B Female 42.5
Sample C Male 47.6
Sample D Male 32.9
Ventral pallidum
nTPM: 39.2
Samples: 4

Max nTPM: 53.1
Min nTPM: 30.8
Sample A Female 30.8
Sample B Female 40.8
Sample C Male 53.1
Sample D Male 32.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 101.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 75.6
Samples: 4

Max nTPM: 90.6
Min nTPM: 65.9
Sample A Male 75.7
Sample B Male 90.6
Sample C Female 65.9
Sample D Female 70.2
Septum
nTPM: 101.3
Samples: 4

Max nTPM: 114.3
Min nTPM: 88.3
Sample A Male 88.3
Sample B Male 114.3
Sample C Female 101.5
Sample D Female 101.0
Ventral forebrain
nTPM: 71.0
Samples: 4

Max nTPM: 77.9
Min nTPM: 63.4
Sample A Male 70.7
Sample B Male 72.1
Sample C Female 77.9
Sample D Female 63.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.5
69059974 Antisense, RP_050317_04_H07, Mouse strain C57BL/6J (56 days, male) 11.5
Pallidum
Expression energy: 10.2
69059974 Antisense, RP_050317_04_H07, Mouse strain C57BL/6J (56 days, male) 10.2

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