HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:99.0 nTPM
HPA:99.0 nTPM
GTEx:119.4 nTPM
FANTOM5:633.7 Scaled Tags Per Million
Pig:283.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047157Antibody CAB005610
Glial cells Not detectedHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.0
Sample id Sample description nTPM
Hippocampus
nTPM: 68.5
1911 Female, age 85, right hemisphere 92.1
1898 Male, age 80, left hemisphere 91.1
2621 Female, age 67, right hemisphere 90.9
1855 Male, age 76, left hemisphere 51.3
2148 Female, age 91, left hemisphere 51.0
2529 Female, age 94, left hemisphere 34.8
Dentate gyrus
nTPM: 66.2
1927 Female, age 91, both hemispheres 118.1
2246 Female, age 85, both hemispheres 63.7
2010 Male, age 76, both hemispheres 61.7
2531 Female, age 67, both hemispheres 55.7
2530 Female, age 94, left hemisphere 53.4
2528 Male, age 74, both hemispheres 44.8
Entorhinal gyrus
nTPM: 53.3
2613 Female, age 94, left hemisphere 81.9
1938 Female, age 85, left hemisphere 79.3
2764 Male, age 80, right hemisphere 59.0
1787 Male, age 76, left hemisphere 50.0
2686 Male, age 75, right hemisphere 30.1
2117 Female, age 91, right hemisphere 19.7
Hippocampus, CA1
nTPM: 96.1
2749 Male, age 80, left hemisphere 223.8
1873 Female, age 85, both hemispheres 86.4
2527 Male, age 74, both hemispheres 69.9
2045 Male, age 76, both hemispheres 61.9
2082 Female, age 91, right hemisphere 38.5
Hippocampus, CA2
nTPM: 71.4
1892 Male, age 76, both hemispheres 110.9
1963 Male, age 80, left hemisphere 85.3
2249 Male, age 74, both hemispheres 79.8
1940 Female, age 85, left hemisphere 65.4
2113 Female, age 91, right hemisphere 50.9
2437 Female, age 94, left hemisphere 35.9
Hippocampus, CA3
nTPM: 99.0
2137 Male, age 80, left hemisphere 228.5
1867 Male, age 76, both hemispheres 89.1
2620 Female, age 94, left hemisphere 79.3
2436 Male, age 74, both hemispheres 73.7
2861 Female, age 67, both hemispheres 67.7
1891 Female, age 85, both hemispheres 55.6
Parahippocampal cortex
nTPM: 68.4
2245 Female, age 91, both hemispheres 99.9
1850 Male, age 80, both hemispheres 90.0
2622 Female, age 67, right hemisphere 73.5
1990 Female, age 91, right hemisphere 72.7
1933 Female, age 85, both hemispheres 70.9
2250 Female, age 67, right hemisphere 69.5
2532 Female, age 72, left hemisphere 64.5
2693 Female, age 94, both hemispheres 61.1
2018 Male, age 76, both hemispheres 52.0
2692 Male, age 74, both hemispheres 30.2
Perirhinal gyrus
nTPM: 93.6
1847 Female, age 91, left hemisphere 120.2
1841 Female, age 85, right hemisphere 107.6
2521 Female, age 94, right hemisphere 96.5
1794 Male, age 80, right hemisphere 82.1
2848 Male, age 76, right hemisphere 61.7
Subiculum
nTPM: 52.3
1901 Male, age 80, both hemispheres 104.5
2042 Male, age 76, both hemispheres 53.4
1977 Female, age 85, both hemispheres 51.6
2438 Female, age 94, left hemisphere 41.8
2619 Male, age 74, both hemispheres 33.5
2729 Female, age 91, right hemisphere 29.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 119.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 119.4
Samples: 197

Max nTPM: 413.9
Min nTPM: 19.3
Std nTPM: 72.1
Median nTPM: 112.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 413.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 336.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 322.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 303.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 300.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 289.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 282.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 272.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 262.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 254.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 233.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 633.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 633.7
FF:10169-103B7 60 years, female 920.7
FF:10153-102I9 76 years, female 346.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 283.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 283.3
Samples: 4

Max nTPM: 376.3
Min nTPM: 206.0
Sample A Female 376.3
Sample B Female 337.3
Sample C Male 206.0
Sample D Male 213.6
Entorhinal cortex
nTPM: 174.3
Samples: 4

Max nTPM: 210.0
Min nTPM: 145.0
Sample A Female 179.8
Sample B Female 210.0
Sample C Male 162.5
Sample D Male 145.0
Subiculum
nTPM: 133.4
Samples: 4

Max nTPM: 176.4
Min nTPM: 114.6
Sample A Female 176.4
Sample B Female 119.1
Sample C Male 123.6
Sample D Male 114.6
Ventral hippocampus
nTPM: 199.2
Samples: 4

Max nTPM: 418.3
Min nTPM: 125.0
Sample A Female 126.8
Sample B Female 125.0
Sample C Male 126.5
Sample D Male 418.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.