COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Low
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.2 nTPM
HPA:7.8 nTPM
GTEx:15.2 nTPM
FANTOM5:10.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA066774
Endothelial cells Not detected
Glandular cells Low
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 7.8
overview
Male, age 54 		Colon sample 67
nTPM: 9.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 7.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 4.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 8.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 15.2
Samples: 373

Max nTPM: 37.7
Min nTPM: 4.5
Std nTPM: 3.8
Median nTPM: 15.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 37.7
GTEX-1QP28-2226-SM-DTX8C 50-59 years, female 29.3
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 26.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 25.4
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 24.6
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 24.6
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 24.5
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 23.8
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 23.3
GTEX-14JG6-1626-SM-5YYBC 30-39 years, female 22.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 22.7
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Colon - Transverse
Average nTPM: 11.6
Samples: 406

Max nTPM: 22.4
Min nTPM: 3.8
Std nTPM: 3.0
Median nTPM: 11.3
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 22.4
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 22.2
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 21.8
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 21.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 20.4
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 20.0
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 19.2
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 19.2
GTEX-X4EO-2526-SM-EWRM8 60-69 years, female 19.0
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 18.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 18.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 10.3
FF:10014-101C5 62,83,84 years, mixed 10.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.