We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HEPN1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • HEPN1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:6.1 nTPM
HPA:6.1 nTPM
GTEx:162.6 nTPM

AMYGDALA - HPA Brain RNA-seq
Max nTPM 6.1
Sample id Sample description nTPM
Amygdala
nTPM: 5.5
2695 Female, age 67, right hemisphere 17.6
2814 Male, age 76, right hemisphere 8.3
2514 Male, age 75, right hemisphere 1.8
1987 Female, age 91, left hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
Basal amygdala
nTPM: 6.1
2609 Male, age 75, right hemisphere 21.4
2685 Female, age 94, left hemisphere 13.8
2827 Female, age 67, right hemisphere 1.8
1955 Male, age 76, both hemispheres 0.0
2110 Male, age 80, left hemisphere 0.0
2243 Female, age 91, right hemisphere 0.0
Central amygdala
nTPM: 0.7
2701 Female, age 91, right hemisphere 3.6
1905 Male, age 76, both hemispheres 0.0
2239 Male, age 80, left hemisphere 0.0
2515 Male, age 75, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 4.1
2428 Male, age 75, right hemisphere 13.1
2829 Male, age 80, left hemisphere 9.9
2240 Male, age 76, both hemispheres 1.6
2242 Female, age 91, right hemisphere 0.0
2429 Female, age 94, left hemisphere 0.0
2535 Female, age 67, right hemisphere 0.0
Lateral amygdala
nTPM: 4.0
2830 Female, age 67, right hemisphere 9.1
2516 Male, age 75, right hemisphere 8.2
1883 Male, age 76, both hemispheres 6.6
2255 Female, age 91, right hemisphere 0.0
2256 Male, age 80, left hemisphere 0.0
2534 Female, age 94, left hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 0.0
1974 Female, age 91, both hemispheres 0.0
2201 Male, age 74, unknown 0.0
2486 Female, age 94, both hemispheres 0.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 162.6
Samples: 152

Max nTPM: 368.3
Min nTPM: 4.4
Std nTPM: 64.5
Median nTPM: 148.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 368.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 341.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 315.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 311.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 310.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 297.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 291.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 287.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 283.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 281.9
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 277.5
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 273.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 271.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 269.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 265.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 260.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 251.3
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 243.5
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 237.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 234.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 233.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 233.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 228.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 228.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 225.9
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 221.9
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 221.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 221.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 220.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 215.4
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 214.0
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 213.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 211.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 208.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 208.1
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 206.9
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 206.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 205.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 199.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 198.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 198.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 198.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 197.8
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 191.5
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 191.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 191.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 190.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 184.6
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 184.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 183.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 180.3
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 179.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 177.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 176.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 175.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 174.1
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 173.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 168.3
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 165.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 164.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 163.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 159.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 159.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 158.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 158.7
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 158.4
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 156.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 155.3
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 155.0
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 152.8
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 151.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 151.1
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 149.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 149.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 148.9
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 148.7
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 148.6
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 148.6
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 148.3
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 148.2
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 145.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 145.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 145.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 144.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 144.5
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 142.3
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 139.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 139.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 138.9
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 138.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 137.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 137.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 136.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 135.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 135.1
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 134.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 134.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 134.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 133.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 133.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 132.8
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 131.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 131.1
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 130.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 129.1
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 128.7
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 127.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 127.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 123.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 123.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 121.9
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 121.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 120.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 119.1
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 115.0
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 114.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 114.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 114.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 114.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 113.4
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 112.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 110.8
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 110.0
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 109.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 109.0
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 108.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 108.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 104.2
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 103.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 102.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 98.1
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 95.4
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 94.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 92.9
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 92.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 92.1
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 91.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 90.9
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 88.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 88.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 86.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 86.2
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 84.9
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 79.7
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 79.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 78.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 73.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 70.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 61.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 42.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 28.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 4.4
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.