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FXYD7
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TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:119.1 nTPM
HPA:119.1 nTPM
GTEx:257.4 nTPM
FANTOM5:84.4 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 119.1
Sample id Sample description nTPM
Amygdala
nTPM: 89.3
2814 Male, age 76, right hemisphere 137.9
2517 Female, age 94, left hemisphere 88.2
1987 Female, age 91, left hemisphere 76.9
2514 Male, age 75, right hemisphere 73.6
2695 Female, age 67, right hemisphere 69.8
Basal amygdala
nTPM: 112.1
2827 Female, age 67, right hemisphere 145.5
2685 Female, age 94, left hemisphere 114.1
2243 Female, age 91, right hemisphere 113.2
1955 Male, age 76, both hemispheres 110.2
2110 Male, age 80, left hemisphere 95.8
2609 Male, age 75, right hemisphere 93.9
Central amygdala
nTPM: 119.1
2826 Female, age 94, left hemisphere 172.7
1905 Male, age 76, both hemispheres 129.6
2239 Male, age 80, left hemisphere 106.1
2701 Female, age 91, right hemisphere 105.3
2515 Male, age 75, right hemisphere 81.6
Corticomedial amygdala
nTPM: 95.0
2535 Female, age 67, right hemisphere 122.9
2240 Male, age 76, both hemispheres 101.6
2829 Male, age 80, left hemisphere 101.1
2429 Female, age 94, left hemisphere 96.2
2428 Male, age 75, right hemisphere 77.4
2242 Female, age 91, right hemisphere 70.4
Lateral amygdala
nTPM: 118.9
2534 Female, age 94, left hemisphere 152.3
1883 Male, age 76, both hemispheres 127.3
2830 Female, age 67, right hemisphere 118.8
2256 Male, age 80, left hemisphere 114.5
2255 Female, age 91, right hemisphere 106.4
2516 Male, age 75, right hemisphere 94.1
Stria terminalis, bed nucleus
nTPM: 113.1
1974 Female, age 91, both hemispheres 148.0
2486 Female, age 94, both hemispheres 107.3
2201 Male, age 74, unknown 84.1

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 257.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 257.4
Samples: 152

Max nTPM: 736.6
Min nTPM: 18.8
Std nTPM: 117.0
Median nTPM: 245.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 736.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 628.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 623.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 589.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 581.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 551.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 539.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 529.4
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 517.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 482.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 468.8
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 421.4
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 395.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 390.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 388.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 384.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 379.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 368.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 362.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 362.1
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 360.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 356.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 346.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 342.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 337.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 336.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 329.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 327.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 324.2
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 321.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 319.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 317.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 311.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 311.0
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 310.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 306.4
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 303.9
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 302.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 302.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 300.9
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 300.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 299.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 299.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 299.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 295.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 294.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 292.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 288.3
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 286.9
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 285.7
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 284.2
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 283.9
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 281.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 280.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 277.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 276.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 275.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 273.0
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 272.0
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 271.8
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 269.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 267.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 266.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 264.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 263.1
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 262.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 259.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 254.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 251.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 250.6
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 249.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 249.1
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 248.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 246.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 246.7
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 245.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 245.0
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 244.0
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 243.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 242.9
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 240.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 239.4
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 237.8
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 236.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 235.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 235.8
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 228.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 228.0
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 227.8
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 221.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 220.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 215.3
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 208.5
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 207.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 205.5
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 204.9
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 203.7
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 202.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 200.5
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 198.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 194.3
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 192.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 192.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 191.6
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 188.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 187.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 186.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 183.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 182.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 180.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 180.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 179.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 177.8
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 177.5
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 177.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 175.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 174.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 172.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 170.8
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 168.5
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 167.0
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 166.2
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 163.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 163.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 159.7
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 157.8
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 157.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 155.3
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 150.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 147.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 146.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 145.3
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 145.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 143.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 138.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 134.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 134.1
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 133.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 132.5
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 123.8
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 118.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 116.7
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 114.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 113.9
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 111.8
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 111.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 106.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 98.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 92.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 85.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 84.2
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 18.8
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 84.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 84.4
FF:10151-102I7 76 years, female 84.4

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