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CERS1
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TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:206.4 nTPM
HPA:206.4 nTPM
GTEx:139.1 nTPM
FANTOM5:273.2 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 206.4
Sample id Sample description nTPM
Amygdala
nTPM: 206.4
2695 Female, age 67, right hemisphere 265.8
1987 Female, age 91, left hemisphere 197.5
2517 Female, age 94, left hemisphere 196.8
2814 Male, age 76, right hemisphere 193.4
2514 Male, age 75, right hemisphere 178.4
Basal amygdala
nTPM: 201.7
2609 Male, age 75, right hemisphere 255.9
2827 Female, age 67, right hemisphere 201.0
2685 Female, age 94, left hemisphere 196.2
2243 Female, age 91, right hemisphere 195.8
2110 Male, age 80, left hemisphere 183.2
1955 Male, age 76, both hemispheres 178.2
Central amygdala
nTPM: 205.7
2515 Male, age 75, right hemisphere 233.6
2826 Female, age 94, left hemisphere 215.3
1905 Male, age 76, both hemispheres 194.5
2701 Female, age 91, right hemisphere 192.5
2239 Male, age 80, left hemisphere 192.4
Corticomedial amygdala
nTPM: 185.5
2428 Male, age 75, right hemisphere 210.6
2535 Female, age 67, right hemisphere 198.3
2242 Female, age 91, right hemisphere 188.3
2829 Male, age 80, left hemisphere 186.3
2429 Female, age 94, left hemisphere 169.8
2240 Male, age 76, both hemispheres 159.9
Lateral amygdala
nTPM: 201.9
2516 Male, age 75, right hemisphere 230.3
2256 Male, age 80, left hemisphere 214.4
2830 Female, age 67, right hemisphere 196.6
2255 Female, age 91, right hemisphere 193.3
2534 Female, age 94, left hemisphere 188.9
1883 Male, age 76, both hemispheres 188.1
Stria terminalis, bed nucleus
nTPM: 165.4
2201 Male, age 74, unknown 190.9
1974 Female, age 91, both hemispheres 155.0
2486 Female, age 94, both hemispheres 150.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 139.1
Samples: 152

Max nTPM: 261.1
Min nTPM: 4.8
Std nTPM: 39.0
Median nTPM: 137.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 261.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 230.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 226.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 222.7
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 222.0
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 213.9
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 212.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 204.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 203.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 201.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 200.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 199.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 195.1
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 191.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 189.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 187.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 186.9
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 183.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 181.9
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 181.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 180.0
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 178.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 178.0
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 177.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 174.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 173.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 173.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 172.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 172.7
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 172.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 172.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 171.2
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 169.6
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 167.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 167.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 166.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 166.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 166.4
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 166.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 165.4
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 163.8
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 162.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 162.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 161.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 159.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 157.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 157.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 157.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 156.7
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 156.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 156.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 155.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 154.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 154.4
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 151.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 150.7
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 150.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 149.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 149.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 149.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 147.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 145.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 144.5
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 144.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 143.7
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 142.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 142.7
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 142.4
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 142.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 142.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 141.4
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 140.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 139.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 138.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 137.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 137.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 136.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 136.8
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 136.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 136.2
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 135.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 135.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 135.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 133.6
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 133.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 133.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 132.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 132.7
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 131.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 131.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 131.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 128.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 128.5
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 127.8
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 126.4
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 125.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 124.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 123.3
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 122.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 121.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 120.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 119.5
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 119.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 118.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 118.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 118.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 117.3
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 116.6
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 116.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 115.9
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 115.9
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 112.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 112.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 112.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 111.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 109.4
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 108.7
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 108.5
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 106.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 106.1
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 104.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 104.2
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 104.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 103.2
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 102.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 100.0
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 98.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 98.4
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 97.5
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 96.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 96.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 95.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 95.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 95.3
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 95.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 89.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 89.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 88.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 88.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 86.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 86.9
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 85.8
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 83.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 83.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 82.4
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 77.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 77.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 75.7
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 73.4
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 71.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 70.5
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 4.8
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 273.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 273.2
FF:10151-102I7 76 years, female 273.2

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