HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:357.5 nTPM
HPA:357.5 nTPM
GTEx:171.4 nTPM
FANTOM5:313.4 Scaled Tags Per Million
Mouse:94.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 357.5
Sample id Sample description nTPM
Hippocampus
nTPM: 356.9
2529 Female, age 94, left hemisphere 364.5
1855 Male, age 76, left hemisphere 361.2
1898 Male, age 80, left hemisphere 361.1
2621 Female, age 67, right hemisphere 353.2
1911 Female, age 85, right hemisphere 351.6
2148 Female, age 91, left hemisphere 349.7
Dentate gyrus
nTPM: 353.2
2010 Male, age 76, both hemispheres 365.0
2530 Female, age 94, left hemisphere 357.2
2246 Female, age 85, both hemispheres 354.5
1927 Female, age 91, both hemispheres 350.6
2528 Male, age 74, both hemispheres 350.3
2531 Female, age 67, both hemispheres 341.7
Entorhinal gyrus
nTPM: 350.8
1787 Male, age 76, left hemisphere 361.9
1938 Female, age 85, left hemisphere 355.4
2117 Female, age 91, right hemisphere 352.9
2686 Male, age 75, right hemisphere 348.5
2764 Male, age 80, right hemisphere 345.9
2613 Female, age 94, left hemisphere 340.4
Hippocampus, CA1
nTPM: 356.2
2045 Male, age 76, both hemispheres 364.9
1873 Female, age 85, both hemispheres 356.7
2527 Male, age 74, both hemispheres 356.2
2749 Male, age 80, left hemisphere 355.8
2082 Female, age 91, right hemisphere 347.4
Hippocampus, CA2
nTPM: 353.5
2249 Male, age 74, both hemispheres 359.6
2437 Female, age 94, left hemisphere 356.0
1892 Male, age 76, both hemispheres 355.5
1963 Male, age 80, left hemisphere 351.8
2113 Female, age 91, right hemisphere 350.8
1940 Female, age 85, left hemisphere 347.1
Hippocampus, CA3
nTPM: 351.1
2436 Male, age 74, both hemispheres 365.1
1867 Male, age 76, both hemispheres 357.2
1891 Female, age 85, both hemispheres 350.6
2137 Male, age 80, left hemisphere 349.1
2861 Female, age 67, both hemispheres 343.9
2620 Female, age 94, left hemisphere 340.7
Parahippocampal cortex
nTPM: 352.8
2018 Male, age 76, both hemispheres 370.2
2250 Female, age 67, right hemisphere 360.2
1850 Male, age 80, both hemispheres 354.2
1933 Female, age 85, both hemispheres 352.3
2532 Female, age 72, left hemisphere 351.0
2692 Male, age 74, both hemispheres 350.6
1990 Female, age 91, right hemisphere 349.5
2245 Female, age 91, both hemispheres 348.3
2622 Female, age 67, right hemisphere 346.3
2693 Female, age 94, both hemispheres 345.8
Perirhinal gyrus
nTPM: 356.2
1847 Female, age 91, left hemisphere 362.6
1794 Male, age 80, right hemisphere 358.2
2521 Female, age 94, right hemisphere 354.3
1841 Female, age 85, right hemisphere 354.0
2848 Male, age 76, right hemisphere 351.7
Subiculum
nTPM: 357.5
2438 Female, age 94, left hemisphere 365.8
2042 Male, age 76, both hemispheres 363.5
1977 Female, age 85, both hemispheres 357.1
2619 Male, age 74, both hemispheres 354.1
1901 Male, age 80, both hemispheres 352.4
2729 Female, age 91, right hemisphere 352.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 171.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 171.4
Samples: 197

Max nTPM: 349.4
Min nTPM: 100.9
Std nTPM: 42.7
Median nTPM: 162.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 349.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 321.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 308.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 296.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 293.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 290.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 287.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 281.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 257.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 255.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 246.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 313.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 313.4
FF:10169-103B7 60 years, female 354.7
FF:10153-102I9 76 years, female 272.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.0
Samples: 4

Max nTPM: 102.0
Min nTPM: 89.4
Sample A Male 89.5
Sample B Male 95.0
Sample C Female 102.0
Sample D Female 89.4
Hippocampal formation
nTPM: 91.8
Samples: 4

Max nTPM: 97.9
Min nTPM: 81.8
Sample A Male 96.1
Sample B Male 81.8
Sample C Female 91.4
Sample D Female 97.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
631702 Antisense, RP_040907_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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