HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.6 nTPM
HPA:12.6 nTPM
GTEx:19.2 nTPM
FANTOM5:4.7 Scaled Tags Per Million
Mouse:17.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
2621 Female, age 67, right hemisphere 16.2
2529 Female, age 94, left hemisphere 14.5
1855 Male, age 76, left hemisphere 12.5
1898 Male, age 80, left hemisphere 12.5
2148 Female, age 91, left hemisphere 12.4
1911 Female, age 85, right hemisphere 7.8
Dentate gyrus
nTPM: 11.8
2530 Female, age 94, left hemisphere 15.2
2531 Female, age 67, both hemispheres 13.3
1927 Female, age 91, both hemispheres 12.1
2010 Male, age 76, both hemispheres 11.0
2528 Male, age 74, both hemispheres 9.6
2246 Female, age 85, both hemispheres 9.3
Entorhinal gyrus
nTPM: 10.8
2613 Female, age 94, left hemisphere 12.4
2686 Male, age 75, right hemisphere 11.7
2764 Male, age 80, right hemisphere 11.5
1787 Male, age 76, left hemisphere 10.1
2117 Female, age 91, right hemisphere 9.8
1938 Female, age 85, left hemisphere 9.2
Hippocampus, CA1
nTPM: 9.5
2749 Male, age 80, left hemisphere 12.1
2527 Male, age 74, both hemispheres 11.3
1873 Female, age 85, both hemispheres 10.1
2045 Male, age 76, both hemispheres 7.2
2082 Female, age 91, right hemisphere 7.1
Hippocampus, CA2
nTPM: 11.3
2437 Female, age 94, left hemisphere 16.3
1963 Male, age 80, left hemisphere 15.6
1892 Male, age 76, both hemispheres 12.9
2113 Female, age 91, right hemisphere 8.5
2249 Male, age 74, both hemispheres 7.7
1940 Female, age 85, left hemisphere 6.5
Hippocampus, CA3
nTPM: 11.4
2861 Female, age 67, both hemispheres 21.0
2436 Male, age 74, both hemispheres 11.3
2620 Female, age 94, left hemisphere 10.1
2137 Male, age 80, left hemisphere 9.8
1867 Male, age 76, both hemispheres 9.3
1891 Female, age 85, both hemispheres 7.0
Parahippocampal cortex
nTPM: 11.0
2622 Female, age 67, right hemisphere 17.4
2245 Female, age 91, both hemispheres 14.2
2250 Female, age 67, right hemisphere 11.4
2693 Female, age 94, both hemispheres 11.4
2692 Male, age 74, both hemispheres 10.9
1933 Female, age 85, both hemispheres 9.3
1990 Female, age 91, right hemisphere 9.2
2018 Male, age 76, both hemispheres 9.1
2532 Female, age 72, left hemisphere 8.8
1850 Male, age 80, both hemispheres 7.7
Perirhinal gyrus
nTPM: 10.1
2521 Female, age 94, right hemisphere 11.6
1794 Male, age 80, right hemisphere 11.4
1841 Female, age 85, right hemisphere 10.0
1847 Female, age 91, left hemisphere 9.2
2848 Male, age 76, right hemisphere 8.5
Subiculum
nTPM: 9.4
2619 Male, age 74, both hemispheres 12.8
2438 Female, age 94, left hemisphere 11.7
1977 Female, age 85, both hemispheres 10.6
2729 Female, age 91, right hemisphere 9.0
1901 Male, age 80, both hemispheres 7.6
2042 Male, age 76, both hemispheres 4.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.2
Samples: 197

Max nTPM: 45.2
Min nTPM: 1.9
Std nTPM: 9.3
Median nTPM: 19.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 41.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 41.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 40.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 40.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 40.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 38.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 37.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 37.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 36.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.7
FF:10153-102I9 76 years, female 5.3
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 18.8
Min nTPM: 15.5
Sample A Male 18.8
Sample B Male 18.0
Sample C Female 15.9
Sample D Female 15.5
Hippocampal formation
nTPM: 17.0
Samples: 4

Max nTPM: 17.8
Min nTPM: 16.1
Sample A Male 17.5
Sample B Male 16.1
Sample C Female 16.6
Sample D Female 17.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69528010 Antisense, RP_050421_02_H08, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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