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RPL41
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3557.6 nTPM
HPA:3557.6 nTPM
GTEx:3102.7 nTPM
FANTOM5:137.7 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 3557.6
Sample id Sample description nTPM
Amygdala
nTPM: 3557.6
2695 Female, age 67, right hemisphere 3742.6
2514 Male, age 75, right hemisphere 3583.5
2517 Female, age 94, left hemisphere 3513.5
2814 Male, age 76, right hemisphere 3481.5
1987 Female, age 91, left hemisphere 3466.8
Basal amygdala
nTPM: 3473.0
2609 Male, age 75, right hemisphere 3613.9
2685 Female, age 94, left hemisphere 3488.5
2827 Female, age 67, right hemisphere 3488.1
2243 Female, age 91, right hemisphere 3447.5
2110 Male, age 80, left hemisphere 3419.0
1955 Male, age 76, both hemispheres 3380.7
Central amygdala
nTPM: 3522.9
2826 Female, age 94, left hemisphere 3694.3
2515 Male, age 75, right hemisphere 3611.4
2701 Female, age 91, right hemisphere 3468.9
2239 Male, age 80, left hemisphere 3429.3
1905 Male, age 76, both hemispheres 3410.7
Corticomedial amygdala
nTPM: 3469.0
2428 Male, age 75, right hemisphere 3565.6
2429 Female, age 94, left hemisphere 3504.9
2829 Male, age 80, left hemisphere 3466.9
2240 Male, age 76, both hemispheres 3438.6
2242 Female, age 91, right hemisphere 3427.3
2535 Female, age 67, right hemisphere 3410.7
Lateral amygdala
nTPM: 3500.4
2516 Male, age 75, right hemisphere 3648.6
2830 Female, age 67, right hemisphere 3586.6
2534 Female, age 94, left hemisphere 3534.9
2256 Male, age 80, left hemisphere 3463.6
2255 Female, age 91, right hemisphere 3400.9
1883 Male, age 76, both hemispheres 3367.6
Stria terminalis, bed nucleus
nTPM: 3414.3
1974 Female, age 91, both hemispheres 3482.5
2201 Male, age 74, unknown 3391.7
2486 Female, age 94, both hemispheres 3368.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3102.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 3102.7
Samples: 152

Max nTPM: 11405.7
Min nTPM: 1530.0
Std nTPM: 1333.9
Median nTPM: 2776.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 11405.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 9844.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 7956.2
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 6402.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 6355.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 5894.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 5031.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 4977.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 4957.3
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 4606.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 4580.7
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 4543.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 4529.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 4437.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 4401.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 4389.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 4273.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 4241.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 4233.4
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 4186.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 4122.0
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 3995.2
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 3965.8
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 3964.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 3913.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 3912.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 3892.9
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 3876.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 3874.5
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 3768.6
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 3763.3
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 3755.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 3734.4
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 3731.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 3637.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 3614.8
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 3576.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 3558.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 3549.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 3524.1
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 3455.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 3453.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 3427.1
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 3406.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 3397.9
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 3333.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 3311.1
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 3298.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 3294.3
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 3271.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 3259.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 3255.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 3207.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 3203.2
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 3194.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 3156.6
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 3143.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 3117.3
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 3111.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 3106.0
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 3100.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 3078.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 3067.0
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 3014.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 3005.0
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 2979.4
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 2970.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 2963.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 2956.4
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 2944.7
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 2942.8
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 2935.5
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 2925.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 2913.8
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 2847.7
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 2801.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 2751.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 2723.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 2717.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 2700.2
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 2694.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 2688.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 2678.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 2677.7
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 2669.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 2668.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 2659.7
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 2657.9
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 2622.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 2622.2
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 2618.0
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 2584.5
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 2573.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 2551.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 2550.6
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 2546.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 2541.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 2535.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 2526.0
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 2524.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 2516.0
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 2489.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 2477.7
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 2465.6
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 2453.9
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 2434.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 2422.8
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 2400.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 2395.6
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 2393.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 2362.3
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 2337.8
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 2334.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 2302.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 2295.0
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 2290.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 2268.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 2265.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 2233.0
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 2210.9
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 2209.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 2208.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 2199.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 2174.2
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 2158.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 2147.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 2129.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 2110.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 2091.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 2038.5
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 2006.4
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1982.7
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1978.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 1961.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1924.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1916.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 1909.4
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 1888.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1885.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1859.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1845.3
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1839.7
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 1824.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 1807.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 1802.5
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 1761.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 1714.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 1697.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 1614.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1573.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 1558.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 1530.0
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 137.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 137.7
FF:10151-102I7 76 years, female 137.7

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