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RPL41
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3600.6 nTPM
HPA:3600.6 nTPM
FANTOM5:119.1 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 3600.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 3477.9
2090 Male, age 80, both hemispheres 3514.8
2301 Female, age 85, both hemispheres 3514.1
2188 Female, age 91, both hemispheres 3496.1
1984 Male, age 76, both hemispheres 3386.6
Dorsal cochlear nucleus
nTPM: 3494.0
2802 Male, age 74, right hemisphere 3544.1
2187 Female, age 91, both hemispheres 3517.8
2370 Male, age 61, both hemispheres 3517.1
2378 Male, age 80, both hemispheres 3487.7
2058 Male, age 76, both hemispheres 3403.1
Dorsal tegmental nucleus
nTPM: 3555.9
2358 Male, age 61, both hemispheres 3672.4
2083 Male, age 80, both hemispheres 3586.3
2326 Male, age 74, both hemispheres 3529.3
1936 Male, age 76, left hemisphere 3435.7
Dorsolateral tegmental area
nTPM: 3543.3
2337 Male, age 61, both hemispheres 3685.5
2654 Male, age 80, both hemispheres 3637.0
2751 Female, age 85, both hemispheres 3486.3
2141 Male, age 76, both hemispheres 3458.4
2360 Male, age 74, both hemispheres 3449.3
Kolliker-Fuse nucleus
nTPM: 3542.2
2315 Male, age 76, right hemisphere 3649.7
2793 Female, age 91, left hemisphere 3490.0
2163 Male, age 80, both hemispheres 3486.8
Lateral lemniscal nuclei
nTPM: 3356.1
2169 Male, age 76, both hemispheres 3433.9
2453 Male, age 74, right hemisphere 3353.3
2320 Female, age 91, left hemisphere 3351.9
2746 Female, age 85, left hemisphere 3340.1
2036 Male, age 80, both hemispheres 3301.2
Lateral parabrachial nucleus
nTPM: 3544.4
2792 Male, age 76, both hemispheres 3671.1
2013 Male, age 80, both hemispheres 3556.4
2790 Male, age 61, both hemispheres 3490.1
2139 Female, age 85, right hemisphere 3459.9
Lateral vestibular nucleus
nTPM: 3483.4
2311 Male, age 80, both hemispheres 3576.7
2184 Male, age 76, both hemispheres 3390.2
Locus coeruleus
nTPM: 3460.2
2720 Male, age 74, both hemispheres 3634.7
2123 Female, age 91, both hemispheres 3488.0
2162 Male, age 80, both hemispheres 3459.3
2317 Female, age 72, unknown 3455.2
1980 Male, age 76, both hemispheres 3404.1
2014 Male, age 55, unknown 3393.3
2788 Male, age 74, unknown 3386.5
Medial olivary nucleus
nTPM: 3600.6
2851 Male, age 80, both hemispheres 3636.3
1962 Male, age 76, both hemispheres 3597.2
1943 Male, age 61, both hemispheres 3586.0
2138 Female, age 91, both hemispheres 3582.8
Medial parabrachial nucleus
nTPM: 3502.5
2170 Female, age 91, both hemispheres 3595.1
2854 Male, age 80, both hemispheres 3559.0
2156 Male, age 61, both hemispheres 3484.7
2786 Male, age 76, both hemispheres 3452.9
2463 Female, age 85, right hemisphere 3420.9
Medial periolivary nuclei
nTPM: 3374.7
2063 Male, age 76, both hemispheres 3452.7
2458 Female, age 91, both hemispheres 3377.4
2081 Male, age 80, both hemispheres 3356.9
2791 Male, age 74, right hemisphere 3356.3
2171 Female, age 85, both hemispheres 3330.2
Motor facial nucleus
nTPM: 3414.8
2795 Female, age 91, both hemispheres 3488.6
2697 Female, age 85, both hemispheres 3482.3
2365 Male, age 74, right hemisphere 3419.2
2126 Male, age 61, both hemispheres 3386.5
2062 Male, age 76, both hemispheres 3376.6
2327 Male, age 80, both hemispheres 3335.6
Motor trigeminal nucleus
nTPM: 3413.8
2335 Male, age 61, both hemispheres 3486.4
2309 Male, age 76, both hemispheres 3437.5
2560 Male, age 74, both hemispheres 3413.3
2079 Male, age 80, both hemispheres 3373.5
2321 Female, age 91, both hemispheres 3358.4
Nuclei of the trapezoid body
nTPM: 3367.3
1983 Male, age 76, both hemispheres 3468.2
2166 Male, age 80, both hemispheres 3389.5
2368 Female, age 91, both hemispheres 3349.9
2159 Male, age 61, both hemispheres 3338.3
2735 Female, age 85, both hemispheres 3290.7
Paramedian reticular nucleus
nTPM: 3450.2
2052 Male, age 76, both hemispheres 3493.2
2313 Male, age 61, both hemispheres 3445.7
2050 Female, age 85, both hemispheres 3444.8
2057 Male, age 80, both hemispheres 3417.2
Pontine nuclei
nTPM: 3388.2
1863 Male, age 55, unknown 3463.3
2319 Female, age 91, both hemispheres 3457.7
2787 Female, age 85, both hemispheres 3412.7
2454 Male, age 74, left hemisphere 3393.8
1968 Male, age 76, left hemisphere 3369.1
2115 Male, age 80, left hemisphere 3358.4
2109 Female, age 72, unknown 3353.5
2727 Male, age 61, right hemisphere 3297.3
Pontine raphe nucleus
nTPM: 3448.0
2853 Male, age 76, midline 3466.4
2122 Female, age 85, midline 3429.6
Posteroventral cochlear nucleus
nTPM: 3504.0
2371 Male, age 61, both hemispheres 3573.8
2341 Male, age 80, both hemispheres 3571.7
2135 Female, age 91, both hemispheres 3520.2
2070 Male, age 76, both hemispheres 3433.5
2752 Female, age 85, both hemispheres 3420.6
Principal sensory trigeminal nucleus
nTPM: 3377.3
2324 Male, age 76, both hemispheres 3419.1
2367 Female, age 91, left hemisphere 3404.6
2158 Male, age 61, both hemispheres 3363.9
2008 Male, age 80, left hemisphere 3321.5
Reticular pontine nucleus, caudal
nTPM: 3404.6
2092 Male, age 76, both hemispheres 3480.4
2559 Male, age 74, both hemispheres 3469.4
2457 Female, age 91, both hemispheres 3370.4
2332 Male, age 80, right hemisphere 3298.2
Reticular pontine nucleus, oral
nTPM: 3461.7
1939 Male, age 80, both hemispheres 3534.5
2167 Male, age 76, both hemispheres 3519.8
2366 Female, age 91, both hemispheres 3506.8
2012 Female, age 85, both hemispheres 3394.7
2361 Male, age 74, both hemispheres 3352.7
Reticulotegmental nucleus
nTPM: 3439.7
2452 Male, age 74, both hemispheres 3485.2
2322 Female, age 91, both hemispheres 3428.0
2333 Male, age 80, both hemispheres 3425.9
2325 Male, age 76, both hemispheres 3419.9
Spinal trigeminal nucleus, oral
nTPM: 3397.5
2164 Male, age 80, both hemispheres 3407.3
1978 Male, age 76, both hemispheres 3405.1
2737 Female, age 85, both hemispheres 3380.3
Subcoeruleus area
nTPM: 3491.5
2451 Male, age 74, both hemispheres 3599.6
1958 Male, age 80, both hemispheres 3509.3
2323 Female, age 91, left hemisphere 3507.0
2369 Female, age 85, left hemisphere 3503.1
2089 Male, age 76, left hemisphere 3338.6
Superior olive
nTPM: 3383.3
2020 Male, age 76, both hemispheres 3451.8
2561 Female, age 91, both hemispheres 3404.1
2364 Male, age 74, right hemisphere 3379.4
2329 Male, age 80, right hemisphere 3348.7
1875 Female, age 85, both hemispheres 3332.3
Superior vestibular nucleus
nTPM: 3517.5
2383 Male, age 74, both hemispheres 3572.2
2015 Male, age 80, both hemispheres 3540.9
2061 Male, age 76, both hemispheres 3439.4
Ventral periolivary nuclei
nTPM: 3414.2
2023 Male, age 76, both hemispheres 3494.1
2794 Female, age 91, left hemisphere 3402.8
2165 Male, age 80, both hemispheres 3402.4
2130 Female, age 85, both hemispheres 3357.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 3441.3
2359 Male, age 61, both hemispheres 3556.1
2840 Female, age 85, both hemispheres 3463.6
1959 Male, age 76, both hemispheres 3446.1
2161 Male, age 80, both hemispheres 3431.0
2456 Female, age 91, both hemispheres 3379.1
2449 Male, age 74, both hemispheres 3371.8

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 119.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 119.1
FF:10182-103D2 60 years, female 131.6
FF:10165-103B3 76 years, female 106.7
Pons
Scaled Tags Per Million: 65.0
FF:10033-101E6 18-54 years, mixed 65.0

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