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RPL41
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  • RPL41
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:3521.6 nTPM
HPA:3148.8 nTPM
GTEx:3521.6 nTPM
FANTOM5:63.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA053169
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 3148.8
overview
Male, age 65
Small intestine sample 232
nTPM: 3896.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 3019.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 2732.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 2947.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3521.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 3521.6
Samples: 187

Max nTPM: 5944.5
Min nTPM: 2060.7
Std nTPM: 736.9
Median nTPM: 3415.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 5944.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 5840.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 5806.6
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 5446.9
GTEX-14PK6-1626-SM-6871I 70-79 years, female 5430.4
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 5315.9
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 5111.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 5059.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 5028.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 5021.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 5011.9
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 4978.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 4962.8
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 4888.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 4804.1
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 4588.7
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 4530.4
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 4513.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 4493.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 4435.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 4427.4
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 4396.0
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 4359.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 4348.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 4317.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 4293.1
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 4248.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4239.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 4209.4
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 4180.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 4168.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 4153.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 4136.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 4113.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 4067.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 4032.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 4029.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 4027.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 4004.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 4004.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 4003.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 3985.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 3941.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 3940.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 3930.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 3922.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 3917.9
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 3910.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 3875.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 3866.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 3858.7
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 3858.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 3854.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 3853.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 3851.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 3824.7
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 3817.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 3804.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 3775.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 3768.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 3726.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 3719.2
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 3714.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 3705.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 3682.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 3682.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 3681.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 3666.6
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 3655.5
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 3640.2
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 3612.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 3570.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 3566.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 3554.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 3538.8
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 3527.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 3519.9
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 3517.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 3505.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 3499.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 3482.6
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 3474.4
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 3473.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 3468.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 3468.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 3463.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 3447.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 3443.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 3441.5
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 3423.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 3422.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 3420.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 3416.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 3415.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 3413.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 3403.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 3385.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 3384.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 3374.3
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 3364.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 3349.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 3346.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 3333.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 3329.6
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 3328.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 3326.8
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 3322.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 3319.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 3297.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 3295.9
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 3276.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 3267.3
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 3266.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 3261.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 3256.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 3243.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 3230.4
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 3228.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 3225.8
GTEX-13111-1426-SM-5DUW3 50-59 years, male 3202.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 3176.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 3160.8
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 3156.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 3151.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 3150.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 3147.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 3126.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 3125.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 3116.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 3113.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 3094.2
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 3093.6
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 3090.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 3089.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 3083.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 3080.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 3076.9
GTEX-1192X-2526-SM-59868 50-59 years, male 3073.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 3071.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 3047.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 3025.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 3000.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 2999.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 2979.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 2976.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 2975.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 2958.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 2930.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 2898.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 2896.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 2889.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 2867.8
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 2863.6
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 2855.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 2851.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 2840.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2840.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 2817.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 2792.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 2779.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 2770.1
GTEX-14PN3-2026-SM-68729 60-69 years, female 2769.9
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 2761.3
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 2726.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 2712.8
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 2685.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 2677.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 2665.9
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 2652.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 2645.4
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 2623.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 2616.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 2599.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 2570.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 2560.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 2544.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 2541.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 2538.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 2519.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 2480.9
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 2467.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 2451.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 2424.9
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 2381.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 2369.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 2334.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 2060.7
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 63.8
FF:10024-101D6 15,40,85 years, mixed 63.8

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