HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.7 nTPM
HPA:23.7 nTPM
GTEx:24.7 nTPM
FANTOM5:11.8 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:4.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067690
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
2529 Female, age 94, left hemisphere 28.1
2621 Female, age 67, right hemisphere 26.4
2148 Female, age 91, left hemisphere 25.3
1911 Female, age 85, right hemisphere 22.8
1898 Male, age 80, left hemisphere 21.5
1855 Male, age 76, left hemisphere 18.3
Dentate gyrus
nTPM: 22.1
1927 Female, age 91, both hemispheres 24.2
2530 Female, age 94, left hemisphere 23.8
2531 Female, age 67, both hemispheres 23.7
2528 Male, age 74, both hemispheres 21.7
2010 Male, age 76, both hemispheres 20.0
2246 Female, age 85, both hemispheres 19.2
Entorhinal gyrus
nTPM: 22.5
2117 Female, age 91, right hemisphere 25.5
1787 Male, age 76, left hemisphere 23.2
2613 Female, age 94, left hemisphere 22.5
2686 Male, age 75, right hemisphere 22.2
2764 Male, age 80, right hemisphere 21.9
1938 Female, age 85, left hemisphere 19.9
Hippocampus, CA1
nTPM: 19.2
2527 Male, age 74, both hemispheres 22.2
2749 Male, age 80, left hemisphere 20.1
1873 Female, age 85, both hemispheres 19.4
2082 Female, age 91, right hemisphere 18.8
2045 Male, age 76, both hemispheres 15.3
Hippocampus, CA2
nTPM: 22.3
1963 Male, age 80, left hemisphere 32.5
2437 Female, age 94, left hemisphere 23.3
1892 Male, age 76, both hemispheres 21.0
2113 Female, age 91, right hemisphere 19.9
2249 Male, age 74, both hemispheres 19.8
1940 Female, age 85, left hemisphere 17.3
Hippocampus, CA3
nTPM: 21.3
2861 Female, age 67, both hemispheres 26.2
1867 Male, age 76, both hemispheres 21.6
1891 Female, age 85, both hemispheres 21.6
2137 Male, age 80, left hemisphere 21.1
2620 Female, age 94, left hemisphere 20.7
2436 Male, age 74, both hemispheres 16.8
Parahippocampal cortex
nTPM: 19.9
2245 Female, age 91, both hemispheres 22.9
2622 Female, age 67, right hemisphere 22.4
1990 Female, age 91, right hemisphere 21.9
2250 Female, age 67, right hemisphere 20.6
2692 Male, age 74, both hemispheres 20.1
2532 Female, age 72, left hemisphere 20.0
1933 Female, age 85, both hemispheres 18.4
2018 Male, age 76, both hemispheres 18.3
1850 Male, age 80, both hemispheres 17.4
2693 Female, age 94, both hemispheres 16.5
Perirhinal gyrus
nTPM: 18.3
1794 Male, age 80, right hemisphere 19.3
1847 Female, age 91, left hemisphere 18.8
2848 Male, age 76, right hemisphere 18.1
2521 Female, age 94, right hemisphere 18.0
1841 Female, age 85, right hemisphere 17.5
Subiculum
nTPM: 21.7
2619 Male, age 74, both hemispheres 22.9
1977 Female, age 85, both hemispheres 22.8
2729 Female, age 91, right hemisphere 22.5
2438 Female, age 94, left hemisphere 21.5
1901 Male, age 80, both hemispheres 21.2
2042 Male, age 76, both hemispheres 19.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.7
Samples: 197

Max nTPM: 68.8
Min nTPM: 4.5
Std nTPM: 7.5
Median nTPM: 23.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 68.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 50.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 45.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 40.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 39.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 39.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 38.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 38.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 37.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.8
FF:10153-102I9 76 years, female 16.4
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 17.5
Min nTPM: 12.2
Sample A Female 17.5
Sample B Female 14.8
Sample C Male 15.4
Sample D Male 12.2
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 17.7
Sample C Male 21.1
Sample D Male 17.1
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 22.1
Min nTPM: 12.2
Sample A Female 22.1
Sample B Female 14.4
Sample C Male 14.4
Sample D Male 12.2
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 22.0
Min nTPM: 12.1
Sample A Female 14.4
Sample B Female 12.1
Sample C Male 22.0
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.3
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.8
Sample A Male 3.8
Sample B Male 4.7
Sample C Female 4.9
Sample D Female 3.9
Hippocampal formation
nTPM: 2.6
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.5
Sample A Male 2.7
Sample B Male 2.9
Sample C Female 1.5
Sample D Female 3.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.