HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:64.9 nTPM
HPA:64.9 nTPM
GTEx:64.2 nTPM
FANTOM5:78.4 Scaled Tags Per Million
Pig:0.7 nTPM
Mouse:0.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026826
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 63.4
1898 Male, age 80, left hemisphere 65.0
1855 Male, age 76, left hemisphere 64.3
2529 Female, age 94, left hemisphere 63.9
2621 Female, age 67, right hemisphere 63.8
1911 Female, age 85, right hemisphere 62.0
2148 Female, age 91, left hemisphere 61.5
Dentate gyrus
nTPM: 61.9
2530 Female, age 94, left hemisphere 63.9
2246 Female, age 85, both hemispheres 63.6
2010 Male, age 76, both hemispheres 62.9
1927 Female, age 91, both hemispheres 61.1
2531 Female, age 67, both hemispheres 60.2
2528 Male, age 74, both hemispheres 59.8
Entorhinal gyrus
nTPM: 63.1
2686 Male, age 75, right hemisphere 65.1
1938 Female, age 85, left hemisphere 64.3
2764 Male, age 80, right hemisphere 64.3
2613 Female, age 94, left hemisphere 62.3
1787 Male, age 76, left hemisphere 62.2
2117 Female, age 91, right hemisphere 60.2
Hippocampus, CA1
nTPM: 62.8
1873 Female, age 85, both hemispheres 64.6
2527 Male, age 74, both hemispheres 62.9
2045 Male, age 76, both hemispheres 62.3
2082 Female, age 91, right hemisphere 62.1
2749 Male, age 80, left hemisphere 62.1
Hippocampus, CA2
nTPM: 63.1
1892 Male, age 76, both hemispheres 66.5
1940 Female, age 85, left hemisphere 64.6
2113 Female, age 91, right hemisphere 63.2
2437 Female, age 94, left hemisphere 62.7
2249 Male, age 74, both hemispheres 61.1
1963 Male, age 80, left hemisphere 60.3
Hippocampus, CA3
nTPM: 62.4
2137 Male, age 80, left hemisphere 64.5
1891 Female, age 85, both hemispheres 64.3
1867 Male, age 76, both hemispheres 64.0
2861 Female, age 67, both hemispheres 60.8
2620 Female, age 94, left hemisphere 60.6
2436 Male, age 74, both hemispheres 59.9
Parahippocampal cortex
nTPM: 62.7
1850 Male, age 80, both hemispheres 65.8
1933 Female, age 85, both hemispheres 63.7
2245 Female, age 91, both hemispheres 63.3
2018 Male, age 76, both hemispheres 63.0
2692 Male, age 74, both hemispheres 62.9
2532 Female, age 72, left hemisphere 62.3
1990 Female, age 91, right hemisphere 61.9
2622 Female, age 67, right hemisphere 61.6
2250 Female, age 67, right hemisphere 61.5
2693 Female, age 94, both hemispheres 61.0
Perirhinal gyrus
nTPM: 64.9
1847 Female, age 91, left hemisphere 67.2
1841 Female, age 85, right hemisphere 65.5
2521 Female, age 94, right hemisphere 65.4
1794 Male, age 80, right hemisphere 63.4
2848 Male, age 76, right hemisphere 63.0
Subiculum
nTPM: 62.5
1901 Male, age 80, both hemispheres 65.5
2042 Male, age 76, both hemispheres 63.6
1977 Female, age 85, both hemispheres 63.1
2438 Female, age 94, left hemisphere 61.7
2619 Male, age 74, both hemispheres 61.1
2729 Female, age 91, right hemisphere 59.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.2
Samples: 197

Max nTPM: 146.1
Min nTPM: 25.1
Std nTPM: 18.7
Median nTPM: 61.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 146.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 142.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 116.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 109.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 102.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 99.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 98.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 95.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 94.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 94.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.4
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.7
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.4
Sample A Female 0.6
Sample B Female 0.8
Sample C Male 0.4
Sample D Male 1.0
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.5
Sample A Female 0.7
Sample B Female 0.8
Sample C Male 0.9
Sample D Male 0.5
Subiculum
nTPM: 0.7
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.2
Sample A Female 0.8
Sample B Female 1.0
Sample C Male 0.2
Sample D Male 0.6
Ventral hippocampus
nTPM: 0.7
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.4
Sample A Female 0.8
Sample B Female 0.8
Sample C Male 0.6
Sample D Male 0.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.3
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69116416 Antisense, RP_050317_02_F04, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.