HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.8 nTPM
HPA:54.8 nTPM
GTEx:39.3 nTPM
FANTOM5:32.8 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:9.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052967
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.5
2529 Female, age 94, left hemisphere 53.2
1855 Male, age 76, left hemisphere 51.9
2621 Female, age 67, right hemisphere 51.9
2148 Female, age 91, left hemisphere 51.7
1898 Male, age 80, left hemisphere 51.4
1911 Female, age 85, right hemisphere 49.0
Dentate gyrus
nTPM: 49.8
2531 Female, age 67, both hemispheres 52.8
2530 Female, age 94, left hemisphere 51.9
2528 Male, age 74, both hemispheres 49.7
2010 Male, age 76, both hemispheres 48.3
2246 Female, age 85, both hemispheres 48.1
1927 Female, age 91, both hemispheres 47.7
Entorhinal gyrus
nTPM: 54.8
2117 Female, age 91, right hemisphere 56.7
2686 Male, age 75, right hemisphere 56.2
2764 Male, age 80, right hemisphere 55.2
1787 Male, age 76, left hemisphere 54.9
1938 Female, age 85, left hemisphere 53.2
2613 Female, age 94, left hemisphere 52.8
Hippocampus, CA1
nTPM: 48.7
2527 Male, age 74, both hemispheres 49.4
2749 Male, age 80, left hemisphere 49.0
2045 Male, age 76, both hemispheres 48.8
1873 Female, age 85, both hemispheres 48.2
2082 Female, age 91, right hemisphere 48.2
Hippocampus, CA2
nTPM: 49.2
1963 Male, age 80, left hemisphere 50.3
2437 Female, age 94, left hemisphere 50.1
1940 Female, age 85, left hemisphere 50.0
2113 Female, age 91, right hemisphere 49.7
1892 Male, age 76, both hemispheres 47.8
2249 Male, age 74, both hemispheres 47.2
Hippocampus, CA3
nTPM: 49.3
2861 Female, age 67, both hemispheres 59.2
2620 Female, age 94, left hemisphere 48.7
1867 Male, age 76, both hemispheres 47.9
1891 Female, age 85, both hemispheres 47.8
2137 Male, age 80, left hemisphere 46.4
2436 Male, age 74, both hemispheres 46.1
Parahippocampal cortex
nTPM: 53.1
2622 Female, age 67, right hemisphere 60.9
2245 Female, age 91, both hemispheres 54.1
2532 Female, age 72, left hemisphere 53.7
2693 Female, age 94, both hemispheres 52.9
2692 Male, age 74, both hemispheres 52.8
2250 Female, age 67, right hemisphere 51.8
1933 Female, age 85, both hemispheres 51.7
2018 Male, age 76, both hemispheres 51.5
1850 Male, age 80, both hemispheres 51.2
1990 Female, age 91, right hemisphere 50.7
Perirhinal gyrus
nTPM: 51.7
2848 Male, age 76, right hemisphere 53.8
1794 Male, age 80, right hemisphere 52.7
2521 Female, age 94, right hemisphere 51.8
1841 Female, age 85, right hemisphere 50.9
1847 Female, age 91, left hemisphere 49.3
Subiculum
nTPM: 50.1
2619 Male, age 74, both hemispheres 53.0
2729 Female, age 91, right hemisphere 52.4
1977 Female, age 85, both hemispheres 51.0
1901 Male, age 80, both hemispheres 48.8
2042 Male, age 76, both hemispheres 48.4
2438 Female, age 94, left hemisphere 47.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.3
Samples: 197

Max nTPM: 82.7
Min nTPM: 17.0
Std nTPM: 13.4
Median nTPM: 36.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 82.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 78.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 77.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 76.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 70.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 70.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 69.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 68.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 67.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 67.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 66.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.8
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.5
Sample A Female 16.2
Sample B Female 12.0
Sample C Male 15.9
Sample D Male 10.5
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.8
Sample A Female 14.5
Sample B Female 16.2
Sample C Male 15.2
Sample D Male 11.8
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 17.6
Min nTPM: 10.1
Sample A Female 17.6
Sample B Female 10.4
Sample C Male 14.6
Sample D Male 10.1
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 12.6
Sample A Female 14.5
Sample B Female 12.6
Sample C Male 22.9
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.1
Sample A Male 10.3
Sample B Male 8.1
Sample C Female 9.9
Sample D Female 9.2
Hippocampal formation
nTPM: 9.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.5
Sample A Male 9.9
Sample B Male 7.5
Sample C Female 9.1
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69981175 Antisense, RP_050512_04_G11, Mouse strain C57BL/6J (56 days, male) 2.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.