COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.0 nTPM
HPA:9.9 nTPM
GTEx:33.0 nTPM
FANTOM5:0.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA045394Antibody HPA045399Antibody HPA046980
Endothelial cells Not detectedNot detectedNot detected
Glandular cells Not detectedNot detectedNot detected
Peripheral nerve/ganglion Not detectedNot detectedNot detected




COLON - HPA RNA-seqi
Average nTPM 9.9
overview
Male, age 54 		Colon sample 67
nTPM: 5.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 6.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 6.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 7.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 16.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 13.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 24.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 33.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 33.0
Samples: 373

Max nTPM: 90.4
Min nTPM: 5.4
Std nTPM: 15.4
Median nTPM: 30.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 90.4
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 82.7
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 80.3
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 79.2
GTEX-18465-2726-SM-7LT9I 50-59 years, male 77.8
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 75.8
GTEX-1J8JJ-2426-SM-D4P4A 60-69 years, female 71.3
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 71.1
GTEX-15EO6-2326-SM-6LPKK 50-59 years, male 70.3
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 67.9
GTEX-1I1GR-2226-SM-ARL7F 60-69 years, male 67.5
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Colon - Transverse
Average nTPM: 23.9
Samples: 406

Max nTPM: 86.1
Min nTPM: 6.0
Std nTPM: 10.1
Median nTPM: 22.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 86.1
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 73.9
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 59.5
GTEX-X4EO-2526-SM-EWRM8 60-69 years, female 54.5
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 54.3
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 53.6
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 51.1
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 50.9
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 47.8
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 46.9
GTEX-16NPV-2626-SM-6M484 50-59 years, female 45.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 0.2
FF:10014-101C5 62,83,84 years, mixed 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.