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AQP1
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  • AQP1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:81.6 nTPM
FANTOM5:77.5 Scaled Tags Per Million
Pig:0.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA019206Antibody CAB001707
Glial cells MediumNot detected
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 81.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.6
Samples: 246

Max nTPM: 545.5
Min nTPM: 1.2
Std nTPM: 79.9
Median nTPM: 55.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 545.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 421.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 409.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 363.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 357.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 327.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 307.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 300.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 299.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 297.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 266.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 253.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 251.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 233.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 225.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 221.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 209.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 201.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 200.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 200.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 197.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 192.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 185.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 183.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 181.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 169.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 165.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 164.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 159.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 154.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 152.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 151.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 148.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 148.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 147.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 144.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 140.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 140.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 138.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 136.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 131.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 128.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 128.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 124.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 121.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 119.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 118.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 116.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 115.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 115.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 109.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 109.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 109.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 107.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 106.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 105.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 103.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 102.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 102.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 100.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 98.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 97.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 96.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 96.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 95.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 94.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 94.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 90.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 89.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 88.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 88.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 87.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 87.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 85.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 84.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 83.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 83.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 83.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 82.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 82.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 79.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 78.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 76.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 76.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 75.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 73.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 72.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 70.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 69.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 69.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 67.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 67.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 67.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 67.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 67.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 65.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 63.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 63.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 62.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 60.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 58.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 57.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 56.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 56.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 56.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 56.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 55.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 55.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 54.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 54.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 52.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 52.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 52.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 51.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 50.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 50.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 50.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 49.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 49.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 48.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 48.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 48.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 47.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 46.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 45.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 45.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 44.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 43.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 41.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 40.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 40.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 39.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 39.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 38.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 37.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 37.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 37.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 36.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 36.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 36.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 35.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 34.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 34.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 34.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 33.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 33.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 33.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 33.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 32.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 32.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 32.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 32.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 31.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 31.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 31.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 30.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 30.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 30.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 30.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 29.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 28.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 28.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 28.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 28.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 27.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 26.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 26.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 26.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 26.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 26.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 25.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 25.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 24.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 24.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 23.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 23.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 22.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 22.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 22.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 21.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 21.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 21.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 21.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 20.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 19.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 19.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 19.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 19.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 18.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 18.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 18.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 18.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 16.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 15.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 15.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 13.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 12.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 11.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 10.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 9.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 8.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 7.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 6.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 77.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 77.5
FF:10164-103B2 76 years, female 77.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.6
Pig sample Sample description nTPM
Caudate
nTPM: 0.6
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.2
Sample A Female 1.6
Sample B Female 0.3
Sample C Male 0.3
Sample D Male 0.2

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