HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.1 nTPM
HPA:55.1 nTPM
GTEx:56.3 nTPM
FANTOM5:154.5 Scaled Tags Per Million
Pig:34.2 nTPM
Mouse:27.4 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001936
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.1
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 33.7
2621 Female, age 67, right hemisphere 19.9
2148 Female, age 91, left hemisphere 18.9
1855 Male, age 76, left hemisphere 13.4
1911 Female, age 85, right hemisphere 11.9
2529 Female, age 94, left hemisphere 9.8
Dentate gyrus
nTPM: 25.3
1927 Female, age 91, both hemispheres 40.5
2531 Female, age 67, both hemispheres 29.4
2246 Female, age 85, both hemispheres 27.7
2528 Male, age 74, both hemispheres 24.3
2010 Male, age 76, both hemispheres 15.7
2530 Female, age 94, left hemisphere 14.1
Entorhinal gyrus
nTPM: 33.0
2764 Male, age 80, right hemisphere 49.6
1938 Female, age 85, left hemisphere 46.8
2613 Female, age 94, left hemisphere 40.1
1787 Male, age 76, left hemisphere 32.5
2686 Male, age 75, right hemisphere 19.3
2117 Female, age 91, right hemisphere 9.5
Hippocampus, CA1
nTPM: 29.2
2749 Male, age 80, left hemisphere 49.9
1873 Female, age 85, both hemispheres 29.1
2527 Male, age 74, both hemispheres 23.6
2045 Male, age 76, both hemispheres 22.9
2082 Female, age 91, right hemisphere 20.2
Hippocampus, CA2
nTPM: 21.7
1892 Male, age 76, both hemispheres 34.3
1963 Male, age 80, left hemisphere 23.4
2437 Female, age 94, left hemisphere 22.1
2249 Male, age 74, both hemispheres 20.0
2113 Female, age 91, right hemisphere 16.2
1940 Female, age 85, left hemisphere 14.1
Hippocampus, CA3
nTPM: 26.6
2620 Female, age 94, left hemisphere 43.1
2137 Male, age 80, left hemisphere 39.7
1867 Male, age 76, both hemispheres 24.0
1891 Female, age 85, both hemispheres 19.6
2861 Female, age 67, both hemispheres 17.7
2436 Male, age 74, both hemispheres 15.4
Parahippocampal cortex
nTPM: 33.5
1850 Male, age 80, both hemispheres 50.9
2250 Female, age 67, right hemisphere 43.3
1990 Female, age 91, right hemisphere 42.2
2693 Female, age 94, both hemispheres 38.4
2245 Female, age 91, both hemispheres 38.1
1933 Female, age 85, both hemispheres 37.0
2532 Female, age 72, left hemisphere 33.6
2622 Female, age 67, right hemisphere 19.8
2692 Male, age 74, both hemispheres 17.6
2018 Male, age 76, both hemispheres 14.1
Perirhinal gyrus
nTPM: 55.1
1847 Female, age 91, left hemisphere 65.5
1794 Male, age 80, right hemisphere 56.8
1841 Female, age 85, right hemisphere 55.4
2848 Male, age 76, right hemisphere 50.9
2521 Female, age 94, right hemisphere 47.0
Subiculum
nTPM: 17.7
1977 Female, age 85, both hemispheres 43.5
1901 Male, age 80, both hemispheres 18.8
2619 Male, age 74, both hemispheres 18.5
2438 Female, age 94, left hemisphere 13.8
2729 Female, age 91, right hemisphere 9.3
2042 Male, age 76, both hemispheres 2.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.3
Samples: 197

Max nTPM: 156.3
Min nTPM: 7.9
Std nTPM: 32.3
Median nTPM: 51.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 156.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 154.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 135.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 133.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 131.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 130.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 129.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 127.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 126.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 124.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 115.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.5
FF:10169-103B7 60 years, female 202.9
FF:10153-102I9 76 years, female 106.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.2
Samples: 4

Max nTPM: 44.1
Min nTPM: 25.6
Sample A Female 44.1
Sample B Female 34.5
Sample C Male 32.6
Sample D Male 25.6
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 39.3
Min nTPM: 27.0
Sample A Female 39.3
Sample B Female 34.0
Sample C Male 31.0
Sample D Male 27.0
Subiculum
nTPM: 34.2
Samples: 4

Max nTPM: 50.6
Min nTPM: 24.5
Sample A Female 50.6
Sample B Female 28.5
Sample C Male 33.0
Sample D Male 24.5
Ventral hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 39.5
Min nTPM: 26.0
Sample A Female 38.8
Sample B Female 26.0
Sample C Male 39.5
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 31.8
Min nTPM: 23.4
Sample A Male 23.4
Sample B Male 27.0
Sample C Female 27.2
Sample D Female 31.8
Hippocampal formation
nTPM: 27.4
Samples: 4

Max nTPM: 31.6
Min nTPM: 24.4
Sample A Male 31.6
Sample B Male 28.9
Sample C Female 24.4
Sample D Female 24.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69816374 Antisense, RP_050505_04_H07, Mouse strain C57BL/6J (56 days, male) 1.7

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