HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:245.2 nTPM
HPA:245.2 nTPM
GTEx:407.0 nTPM
FANTOM5:745.7 Scaled Tags Per Million
Pig:43.7 nTPM
Mouse:314.6 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003868Antibody CAB005284
Glial cells Not detectedNot detected
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 245.2
Sample id Sample description nTPM
Hippocampus
nTPM: 204.3
1898 Male, age 80, left hemisphere 243.6
2529 Female, age 94, left hemisphere 211.0
2621 Female, age 67, right hemisphere 209.4
1911 Female, age 85, right hemisphere 203.3
1855 Male, age 76, left hemisphere 192.2
2148 Female, age 91, left hemisphere 166.3
Dentate gyrus
nTPM: 221.0
2530 Female, age 94, left hemisphere 285.0
2010 Male, age 76, both hemispheres 237.0
1927 Female, age 91, both hemispheres 215.3
2246 Female, age 85, both hemispheres 206.7
2528 Male, age 74, both hemispheres 192.5
2531 Female, age 67, both hemispheres 189.7
Entorhinal gyrus
nTPM: 174.3
2764 Male, age 80, right hemisphere 227.3
1787 Male, age 76, left hemisphere 198.6
1938 Female, age 85, left hemisphere 176.8
2613 Female, age 94, left hemisphere 162.9
2117 Female, age 91, right hemisphere 162.3
2686 Male, age 75, right hemisphere 117.8
Hippocampus, CA1
nTPM: 245.2
2749 Male, age 80, left hemisphere 368.4
2527 Male, age 74, both hemispheres 276.9
2082 Female, age 91, right hemisphere 207.7
2045 Male, age 76, both hemispheres 196.6
1873 Female, age 85, both hemispheres 176.6
Hippocampus, CA2
nTPM: 215.6
2249 Male, age 74, both hemispheres 273.0
1963 Male, age 80, left hemisphere 249.6
2437 Female, age 94, left hemisphere 207.1
1892 Male, age 76, both hemispheres 204.1
2113 Female, age 91, right hemisphere 192.6
1940 Female, age 85, left hemisphere 167.5
Hippocampus, CA3
nTPM: 214.3
2137 Male, age 80, left hemisphere 315.5
2436 Male, age 74, both hemispheres 282.9
1867 Male, age 76, both hemispheres 198.0
2861 Female, age 67, both hemispheres 171.2
2620 Female, age 94, left hemisphere 169.3
1891 Female, age 85, both hemispheres 149.2
Parahippocampal cortex
nTPM: 177.5
2245 Female, age 91, both hemispheres 245.9
2250 Female, age 67, right hemisphere 215.3
2018 Male, age 76, both hemispheres 202.5
2532 Female, age 72, left hemisphere 200.6
1990 Female, age 91, right hemisphere 180.6
1933 Female, age 85, both hemispheres 173.6
1850 Male, age 80, both hemispheres 166.0
2622 Female, age 67, right hemisphere 143.5
2693 Female, age 94, both hemispheres 130.2
2692 Male, age 74, both hemispheres 117.3
Perirhinal gyrus
nTPM: 207.3
2521 Female, age 94, right hemisphere 248.7
1794 Male, age 80, right hemisphere 230.6
1847 Female, age 91, left hemisphere 222.4
1841 Female, age 85, right hemisphere 179.0
2848 Male, age 76, right hemisphere 155.7
Subiculum
nTPM: 175.1
1901 Male, age 80, both hemispheres 201.0
1977 Female, age 85, both hemispheres 199.4
2438 Female, age 94, left hemisphere 172.8
2042 Male, age 76, both hemispheres 171.2
2619 Male, age 74, both hemispheres 164.5
2729 Female, age 91, right hemisphere 141.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 407.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 407.0
Samples: 197

Max nTPM: 1096.2
Min nTPM: 82.4
Std nTPM: 169.0
Median nTPM: 382.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1096.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 983.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 955.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 925.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 856.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 801.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 764.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 757.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 741.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 732.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 712.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 745.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 745.7
FF:10169-103B7 60 years, female 1099.7
FF:10153-102I9 76 years, female 391.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.8
Samples: 4

Max nTPM: 61.9
Min nTPM: 33.4
Sample A Female 61.9
Sample B Female 39.2
Sample C Male 40.5
Sample D Male 33.4
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 43.2
Min nTPM: 32.1
Sample A Female 43.2
Sample B Female 41.4
Sample C Male 39.0
Sample D Male 32.1
Subiculum
nTPM: 40.9
Samples: 4

Max nTPM: 54.8
Min nTPM: 35.9
Sample A Female 54.8
Sample B Female 36.1
Sample C Male 36.8
Sample D Male 35.9
Ventral hippocampus
nTPM: 43.2
Samples: 4

Max nTPM: 52.9
Min nTPM: 27.7
Sample A Female 49.1
Sample B Female 27.7
Sample C Male 52.9
Sample D Male 43.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 314.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.6
Samples: 4

Max nTPM: 336.6
Min nTPM: 287.3
Sample A Male 312.9
Sample B Male 336.6
Sample C Female 287.3
Sample D Female 321.5
Hippocampal formation
nTPM: 296.6
Samples: 4

Max nTPM: 348.5
Min nTPM: 262.5
Sample A Male 285.5
Sample B Male 289.7
Sample C Female 262.5
Sample D Female 348.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
2407 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 2.6
2408 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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