COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:73.1 nTPM
HPA:8.7 nTPM
GTEx:73.1 nTPM
FANTOM5:54.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 8.7
overview
Male, age 54 		Colon sample 67
nTPM: 0.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 17.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 18.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 10.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 18.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 15.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 1.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 5.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 73.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 73.1
Samples: 373

Max nTPM: 266.9
Min nTPM: 27.0
Std nTPM: 19.9
Median nTPM: 72.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 266.9
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 140.2
GTEX-17F96-2126-SM-7KFSM 70-79 years, male 134.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 123.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 120.9
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 116.1
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 113.7
GTEX-1E2YA-2526-SM-7IGOU 50-59 years, male 112.4
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 110.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 109.7
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 108.0
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Colon - Transverse
Average nTPM: 53.4
Samples: 406

Max nTPM: 109.4
Min nTPM: 25.7
Std nTPM: 13.4
Median nTPM: 50.5
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 109.4
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 107.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 94.3
GTEX-117YX-0826-SM-5H11J 50-59 years, male 91.1
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 91.1
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 90.0
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 88.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 87.0
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 86.9
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 86.0
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 85.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 54.5
FF:10014-101C5 62,83,84 years, mixed 54.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.