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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:469.0 nTPM
FANTOM5:112.3 Scaled Tags Per Million
Pig:57.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA070412
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 469.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 469.0
Samples: 246

Max nTPM: 1298.1
Min nTPM: 269.1
Std nTPM: 140.2
Median nTPM: 445.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1298.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1192.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1157.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1116.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1012.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 869.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 847.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 823.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 702.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 696.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 689.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 665.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 661.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 659.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 654.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 654.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 653.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 643.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 634.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 628.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 614.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 610.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 608.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 601.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 599.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 597.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 592.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 590.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 584.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 584.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 581.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 580.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 577.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 569.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 569.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 566.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 564.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 563.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 562.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 559.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 557.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 557.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 553.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 544.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 536.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 531.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 529.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 528.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 526.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 525.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 524.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 522.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 522.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 519.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 516.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 516.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 516.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 515.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 514.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 512.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 508.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 508.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 508.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 507.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 507.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 507.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 506.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 505.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 505.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 504.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 502.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 501.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 500.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 500.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 495.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 492.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 491.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 491.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 489.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 487.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 487.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 487.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 487.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 485.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 482.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 479.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 477.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 477.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 477.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 477.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 476.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 476.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 474.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 470.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 470.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 469.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 468.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 467.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 467.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 466.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 466.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 465.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 465.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 464.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 462.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 462.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 461.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 461.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 461.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 460.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 459.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 458.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 456.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 456.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 455.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 452.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 450.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 450.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 450.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 449.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 447.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 446.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 446.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 445.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 440.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 440.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 439.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 438.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 438.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 437.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 437.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 437.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 437.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 436.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 434.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 433.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 432.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 432.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 429.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 429.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 426.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 425.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 425.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 424.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 422.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 420.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 420.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 419.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 417.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 416.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 414.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 414.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 412.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 412.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 411.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 410.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 409.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 408.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 407.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 407.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 407.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 406.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 406.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 406.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 405.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 405.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 403.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 402.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 402.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 401.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 401.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 400.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 397.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 397.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 396.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 395.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 392.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 391.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 390.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 390.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 389.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 388.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 387.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 386.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 385.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 383.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 383.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 382.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 381.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 379.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 379.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 378.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 377.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 377.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 376.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 376.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 375.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 375.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 374.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 374.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 371.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 371.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 370.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 369.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 368.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 368.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 367.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 364.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 364.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 361.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 361.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 361.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 359.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 358.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 355.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 355.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 354.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 351.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 349.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 348.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 347.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 346.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 345.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 345.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 343.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 343.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 339.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 338.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 338.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 335.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 332.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 327.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 323.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 322.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 316.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 313.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 306.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 302.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 301.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 289.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 281.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 276.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 275.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 273.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 271.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 269.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 112.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 112.3
FF:10164-103B2 76 years, female 112.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 57.4
Pig sample Sample description nTPM
Caudate
nTPM: 57.4
Samples: 4

Max nTPM: 65.9
Min nTPM: 43.9
Sample A Female 59.4
Sample B Female 60.3
Sample C Male 65.9
Sample D Male 43.9

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