HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:130.1 nTPM
HPA:130.1 nTPM
GTEx:150.4 nTPM
FANTOM5:34.2 Scaled Tags Per Million
Pig:51.6 nTPM
Mouse:105.1 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 130.1
Sample id Sample description nTPM
Hippocampus
nTPM: 104.8
2621 Female, age 67, right hemisphere 121.4
1898 Male, age 80, left hemisphere 118.7
2148 Female, age 91, left hemisphere 112.2
1855 Male, age 76, left hemisphere 98.4
2529 Female, age 94, left hemisphere 93.3
1911 Female, age 85, right hemisphere 85.1
Dentate gyrus
nTPM: 113.1
2530 Female, age 94, left hemisphere 131.0
1927 Female, age 91, both hemispheres 129.7
2531 Female, age 67, both hemispheres 119.3
2010 Male, age 76, both hemispheres 104.9
2528 Male, age 74, both hemispheres 97.5
2246 Female, age 85, both hemispheres 96.2
Entorhinal gyrus
nTPM: 123.7
2613 Female, age 94, left hemisphere 155.6
2764 Male, age 80, right hemisphere 136.8
2686 Male, age 75, right hemisphere 134.4
1938 Female, age 85, left hemisphere 117.0
1787 Male, age 76, left hemisphere 114.3
2117 Female, age 91, right hemisphere 83.8
Hippocampus, CA1
nTPM: 104.2
2749 Male, age 80, left hemisphere 128.9
1873 Female, age 85, both hemispheres 107.5
2045 Male, age 76, both hemispheres 103.2
2082 Female, age 91, right hemisphere 91.1
2527 Male, age 74, both hemispheres 90.5
Hippocampus, CA2
nTPM: 105.3
1892 Male, age 76, both hemispheres 125.2
1963 Male, age 80, left hemisphere 120.3
2437 Female, age 94, left hemisphere 112.5
1940 Female, age 85, left hemisphere 103.7
2113 Female, age 91, right hemisphere 87.4
2249 Male, age 74, both hemispheres 82.8
Hippocampus, CA3
nTPM: 110.0
2861 Female, age 67, both hemispheres 140.5
2620 Female, age 94, left hemisphere 140.0
2137 Male, age 80, left hemisphere 108.8
1867 Male, age 76, both hemispheres 104.2
1891 Female, age 85, both hemispheres 90.8
2436 Male, age 74, both hemispheres 75.7
Parahippocampal cortex
nTPM: 120.6
2622 Female, age 67, right hemisphere 157.4
1850 Male, age 80, both hemispheres 128.5
2693 Female, age 94, both hemispheres 123.2
2692 Male, age 74, both hemispheres 122.1
2245 Female, age 91, both hemispheres 120.3
2532 Female, age 72, left hemisphere 118.6
1990 Female, age 91, right hemisphere 115.8
1933 Female, age 85, both hemispheres 113.1
2250 Female, age 67, right hemisphere 110.8
2018 Male, age 76, both hemispheres 96.4
Perirhinal gyrus
nTPM: 130.1
1794 Male, age 80, right hemisphere 141.5
1847 Female, age 91, left hemisphere 138.7
1841 Female, age 85, right hemisphere 124.6
2521 Female, age 94, right hemisphere 123.4
2848 Male, age 76, right hemisphere 122.2
Subiculum
nTPM: 98.5
2619 Male, age 74, both hemispheres 121.5
1977 Female, age 85, both hemispheres 109.5
1901 Male, age 80, both hemispheres 97.5
2438 Female, age 94, left hemisphere 91.0
2729 Female, age 91, right hemisphere 90.2
2042 Male, age 76, both hemispheres 81.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 150.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 150.4
Samples: 197

Max nTPM: 444.4
Min nTPM: 26.4
Std nTPM: 72.9
Median nTPM: 139.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 444.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 438.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 387.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 371.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 344.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 314.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 294.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 290.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 286.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 282.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 269.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.2
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 28.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 34.4
Min nTPM: 16.5
Sample A Female 34.4
Sample B Female 26.4
Sample C Male 26.0
Sample D Male 16.5
Entorhinal cortex
nTPM: 51.6
Samples: 4

Max nTPM: 65.1
Min nTPM: 41.4
Sample A Female 54.1
Sample B Female 45.8
Sample C Male 65.1
Sample D Male 41.4
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 62.0
Min nTPM: 29.8
Sample A Female 62.0
Sample B Female 37.6
Sample C Male 29.8
Sample D Male 36.1
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 31.6
Min nTPM: 18.7
Sample A Female 25.7
Sample B Female 19.7
Sample C Male 31.6
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.1
Samples: 4

Max nTPM: 111.4
Min nTPM: 101.2
Sample A Male 101.2
Sample B Male 111.4
Sample C Female 103.1
Sample D Female 104.7
Hippocampal formation
nTPM: 85.2
Samples: 4

Max nTPM: 97.1
Min nTPM: 77.8
Sample A Male 97.1
Sample B Male 77.8
Sample C Female 81.9
Sample D Female 84.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
2042 Antisense, RP_040324_01_C10, Mouse strain C57BL/6J (56 days, male) 4.3
79556628 Antisense, RP_071101_01_A06, Mouse strain C57BL/6J (56 days, male) 3.9
79544844 Antisense, RP_071101_01_A06, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

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