HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.6 nTPM
HPA:57.6 nTPM
GTEx:50.3 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Mouse:42.4 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040873
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.6
Sample id Sample description nTPM
Hippocampus
nTPM: 55.7
1898 Male, age 80, left hemisphere 60.6
1855 Male, age 76, left hemisphere 56.0
2621 Female, age 67, right hemisphere 56.0
2148 Female, age 91, left hemisphere 54.3
1911 Female, age 85, right hemisphere 53.9
2529 Female, age 94, left hemisphere 53.3
Dentate gyrus
nTPM: 55.8
2010 Male, age 76, both hemispheres 58.6
2528 Male, age 74, both hemispheres 57.0
1927 Female, age 91, both hemispheres 56.9
2530 Female, age 94, left hemisphere 56.4
2246 Female, age 85, both hemispheres 53.8
2531 Female, age 67, both hemispheres 51.9
Entorhinal gyrus
nTPM: 55.8
2764 Male, age 80, right hemisphere 59.1
1938 Female, age 85, left hemisphere 56.3
1787 Male, age 76, left hemisphere 56.0
2117 Female, age 91, right hemisphere 55.9
2613 Female, age 94, left hemisphere 54.9
2686 Male, age 75, right hemisphere 52.5
Hippocampus, CA1
nTPM: 57.5
2749 Male, age 80, left hemisphere 63.3
1873 Female, age 85, both hemispheres 57.1
2045 Male, age 76, both hemispheres 57.0
2527 Male, age 74, both hemispheres 55.7
2082 Female, age 91, right hemisphere 54.4
Hippocampus, CA2
nTPM: 57.2
1963 Male, age 80, left hemisphere 61.6
1892 Male, age 76, both hemispheres 60.5
2249 Male, age 74, both hemispheres 58.2
2437 Female, age 94, left hemisphere 54.7
1940 Female, age 85, left hemisphere 54.3
2113 Female, age 91, right hemisphere 54.0
Hippocampus, CA3
nTPM: 56.3
2436 Male, age 74, both hemispheres 58.9
2137 Male, age 80, left hemisphere 58.8
1867 Male, age 76, both hemispheres 58.5
2620 Female, age 94, left hemisphere 55.9
1891 Female, age 85, both hemispheres 53.8
2861 Female, age 67, both hemispheres 51.7
Parahippocampal cortex
nTPM: 54.4
1850 Male, age 80, both hemispheres 56.7
1933 Female, age 85, both hemispheres 56.2
1990 Female, age 91, right hemisphere 55.7
2018 Male, age 76, both hemispheres 55.6
2250 Female, age 67, right hemisphere 54.6
2245 Female, age 91, both hemispheres 54.2
2693 Female, age 94, both hemispheres 54.1
2532 Female, age 72, left hemisphere 53.8
2622 Female, age 67, right hemisphere 52.2
2692 Male, age 74, both hemispheres 51.3
Perirhinal gyrus
nTPM: 57.6
1847 Female, age 91, left hemisphere 60.2
1794 Male, age 80, right hemisphere 59.3
1841 Female, age 85, right hemisphere 57.6
2848 Male, age 76, right hemisphere 55.4
2521 Female, age 94, right hemisphere 55.3
Subiculum
nTPM: 54.3
1901 Male, age 80, both hemispheres 56.2
1977 Female, age 85, both hemispheres 55.7
2042 Male, age 76, both hemispheres 54.9
2619 Male, age 74, both hemispheres 54.8
2729 Female, age 91, right hemisphere 53.9
2438 Female, age 94, left hemisphere 50.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.3
Samples: 197

Max nTPM: 96.7
Min nTPM: 29.5
Std nTPM: 10.9
Median nTPM: 49.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 96.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 94.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 85.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 75.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 74.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 74.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 72.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 70.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 69.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.7
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 45.1
Min nTPM: 39.4
Sample A Male 40.7
Sample B Male 45.1
Sample C Female 39.4
Sample D Female 44.3
Hippocampal formation
nTPM: 42.5
Samples: 4

Max nTPM: 46.2
Min nTPM: 39.6
Sample A Male 46.2
Sample B Male 40.0
Sample C Female 39.6
Sample D Female 44.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
686209 Antisense, RP_040916_01_B05, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.