HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.2 nTPM
HPA:18.2 nTPM
GTEx:13.9 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:40.6 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051801Antibody HPA054755Antibody CAB034314
Glial cells LowLowLow
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
1898 Male, age 80, left hemisphere 19.2
2148 Female, age 91, left hemisphere 16.8
1911 Female, age 85, right hemisphere 16.7
2621 Female, age 67, right hemisphere 16.2
2529 Female, age 94, left hemisphere 15.8
1855 Male, age 76, left hemisphere 15.1
Dentate gyrus
nTPM: 16.0
1927 Female, age 91, both hemispheres 17.8
2010 Male, age 76, both hemispheres 16.5
2528 Male, age 74, both hemispheres 16.1
2530 Female, age 94, left hemisphere 15.8
2246 Female, age 85, both hemispheres 15.6
2531 Female, age 67, both hemispheres 14.4
Entorhinal gyrus
nTPM: 17.2
1938 Female, age 85, left hemisphere 19.1
2117 Female, age 91, right hemisphere 18.3
2764 Male, age 80, right hemisphere 18.1
2613 Female, age 94, left hemisphere 16.2
1787 Male, age 76, left hemisphere 16.0
2686 Male, age 75, right hemisphere 15.7
Hippocampus, CA1
nTPM: 16.8
2749 Male, age 80, left hemisphere 20.7
2527 Male, age 74, both hemispheres 17.2
1873 Female, age 85, both hemispheres 16.5
2082 Female, age 91, right hemisphere 15.9
2045 Male, age 76, both hemispheres 13.9
Hippocampus, CA2
nTPM: 17.0
1892 Male, age 76, both hemispheres 18.6
2249 Male, age 74, both hemispheres 18.6
2113 Female, age 91, right hemisphere 16.9
1963 Male, age 80, left hemisphere 16.8
1940 Female, age 85, left hemisphere 15.8
2437 Female, age 94, left hemisphere 15.1
Hippocampus, CA3
nTPM: 17.0
2137 Male, age 80, left hemisphere 19.7
2436 Male, age 74, both hemispheres 18.8
1891 Female, age 85, both hemispheres 17.5
2620 Female, age 94, left hemisphere 15.8
1867 Male, age 76, both hemispheres 15.6
2861 Female, age 67, both hemispheres 14.8
Parahippocampal cortex
nTPM: 16.9
1850 Male, age 80, both hemispheres 18.7
1990 Female, age 91, right hemisphere 18.3
2693 Female, age 94, both hemispheres 17.2
1933 Female, age 85, both hemispheres 17.0
2245 Female, age 91, both hemispheres 16.8
2692 Male, age 74, both hemispheres 16.6
2250 Female, age 67, right hemisphere 16.5
2622 Female, age 67, right hemisphere 16.4
2018 Male, age 76, both hemispheres 16.2
2532 Female, age 72, left hemisphere 15.7
Perirhinal gyrus
nTPM: 18.2
1847 Female, age 91, left hemisphere 20.5
1794 Male, age 80, right hemisphere 19.5
1841 Female, age 85, right hemisphere 18.0
2848 Male, age 76, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.2
Subiculum
nTPM: 17.5
2438 Female, age 94, left hemisphere 18.5
1901 Male, age 80, both hemispheres 18.3
2619 Male, age 74, both hemispheres 17.6
1977 Female, age 85, both hemispheres 17.5
2729 Female, age 91, right hemisphere 16.5
2042 Male, age 76, both hemispheres 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 25.8
Min nTPM: 3.9
Std nTPM: 4.3
Median nTPM: 13.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 25.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 25.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 24.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 24.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 23.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 23.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 22.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 22.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 22.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10153-102I9 76 years, female 35.0
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.7
Sample A Female 18.7
Sample B Female 15.7
Sample C Male 17.3
Sample D Male 14.7
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.2
Sample A Female 16.4
Sample B Female 18.1
Sample C Male 16.2
Sample D Male 14.2
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 18.5
Min nTPM: 15.3
Sample A Female 18.5
Sample B Female 15.4
Sample C Male 17.0
Sample D Male 15.3
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 18.6
Min nTPM: 14.9
Sample A Female 15.7
Sample B Female 14.9
Sample C Male 18.6
Sample D Male 17.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 36.4
Min nTPM: 33.4
Sample A Male 33.9
Sample B Male 35.2
Sample C Female 36.4
Sample D Female 33.4
Hippocampal formation
nTPM: 40.6
Samples: 4

Max nTPM: 43.0
Min nTPM: 38.0
Sample A Male 43.0
Sample B Male 38.0
Sample C Female 40.1
Sample D Female 41.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
67870467 Antisense, RP_041018_01_D09, Mouse strain C57BL/6J (56 days, male) 9.4
74990487 Antisense, RP_060410_01_A10, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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