COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:70.7 nTPM
HPA:55.8 nTPM
GTEx:70.7 nTPM
FANTOM5:132.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 55.8
overview
Male, age 54 		Colon sample 67
nTPM: 44.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 44.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 43.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 53.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 44.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 87.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 64.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 64.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 58.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 64.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 52
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 48.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 54.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 70.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 70.7
Samples: 373

Max nTPM: 142.4
Min nTPM: 32.5
Std nTPM: 13.8
Median nTPM: 70.0
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 142.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 135.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 118.6
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 112.6
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 109.6
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 108.5
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 104.9
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 101.2
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 100.2
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 99.2
GTEX-1HBPH-2526-SM-ACKXK 40-49 years, female 98.3
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Colon - Transverse
Average nTPM: 56.2
Samples: 406

Max nTPM: 105.1
Min nTPM: 32.5
Std nTPM: 12.2
Median nTPM: 54.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 105.1
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 103.3
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 101.0
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 97.7
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 88.5
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 88.0
GTEX-17F96-2026-SM-79ON4 70-79 years, male 87.8
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 87.8
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 87.0
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 86.8
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 85.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 132.9
FF:10014-101C5 62,83,84 years, mixed 132.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.