BASAL GANGLIA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:0.3 nTPM
HPA:0.3 nTPM
GTEx:0.1 nTPM
FANTOM5:13.2 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi
Antibody HPA024667
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.2
2290 Female, age 72, unknown 0.4
1854 Male, age 80, left hemisphere 0.2
2288 Male, age 75, left hemisphere 0.2
1781 Male, age 74, unknown 0.1
1857 Female, age 85, left hemisphere 0.1
2289 Male, age 61, right hemisphere 0.1
2481 Female, age 94, left hemisphere 0.1
2846 Female, age 79, unknown 0.1
Claustrum
nTPM: 0.3
2491 Male, age 75, both hemispheres 0.5
2198 Male, age 80, both hemispheres 0.4
2284 Female, age 91, both hemispheres 0.3
2645 Female, age 72, unknown 0.3
1956 Male, age 74, unknown 0.2
2196 Female, age 79, unknown 0.2
2292 Female, age 85, both hemispheres 0.2
2392 Female, age 94, both hemispheres 0.2
2568 Male, age 61, both hemispheres 0.1
Globus pallidus, externus
nTPM: 0.2
2772 Female, age 79, unknown 0.4
1996 Male, age 80, right hemisphere 0.2
2567 Female, age 72, unknown 0.2
2646 Male, age 61, right hemisphere 0.2
2395 Male, age 75, both hemispheres 0.1
Globus pallidus, internus
nTPM: 0.2
2111 Female, age 85, right hemisphere 0.4
1818 Male, age 74, unknown 0.3
2287 Male, age 75, right hemisphere 0.3
2483 Female, age 94, right hemisphere 0.2
2037 Male, age 80, right hemisphere 0.1
2566 Female, age 72, unknown 0.1
2778 Female, age 91, both hemispheres 0.1
Nucleus accumbens
nTPM: 0.2
2391 Female, age 94, left hemisphere 0.4
1856 Female, age 91, right hemisphere 0.3
1806 Female, age 85, left hemisphere 0.2
2698 Female, age 72, unknown 0.2
2732 Male, age 80, right hemisphere 0.2
2824 Male, age 61, right hemisphere 0.2
1783 Male, age 74, unknown 0.1
2286 Male, age 75, left hemisphere 0.1
Nucleus basalis of Meynert
nTPM: 0.2
2569 Male, age 61, both hemispheres 0.3
2393 Male, age 80, right hemisphere 0.2
2484 Female, age 94, left hemisphere 0.1
2821 Male, age 75, both hemispheres 0.1
Nucleus of the diagonal band
nTPM: 0.2
2029 Male, age 61, right hemisphere 0.4
1812 Female, age 91, both hemispheres 0.3
1979 Male, age 74, unknown 0.2
2775 Male, age 80, right hemisphere 0.2
2195 Female, age 85, both hemispheres 0.1
Olfactory tubercle
nTPM: 0.1
1846 Male, age 80, right hemisphere 0.1
1998 Female, age 91, both hemispheres 0.1
2487 Female, age 94, left hemisphere 0.1
2856 Male, age 75, right hemisphere 0.1
Putamen
nTPM: 0.2
2466 Female, age 79, unknown 0.2
2489 Female, age 72, unknown 0.2
2647 Male, age 75, left hemisphere 0.2
1829 Male, age 74, unknown 0.1
1838 Male, age 80, right hemisphere 0.1
1937 Female, age 91, right hemisphere 0.1
2482 Female, age 94, left hemisphere 0.1
Septal nuclei
nTPM: 0.2
2009 Female, age 91, both hemispheres 0.3
1960 Male, age 74, unknown 0.2
2031 Female, age 72, unknown 0.2
2199 Male, age 80, right hemisphere 0.2
2394 Male, age 61, left hemisphere 0.2
2059 Female, age 85, both hemispheres 0.1
2629 Female, age 94, right hemisphere 0.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.1
Samples: 246

Max nTPM: 1.9
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 0.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 0.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 0.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 0.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 0.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.1
Samples: 246

Max nTPM: 2.3
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM:
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 2.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 1.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 0.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 0.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 0.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 0.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 0.6
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Brain - Putamen (basal ganglia)
Average nTPM: 0.1
Samples: 205

Max nTPM: 2.1
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 2.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 0.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 0.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 0.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 0.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 0.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 0.8
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.2
FF:10164-103B2 76 years, female 13.2
Globus pallidus
Scaled Tags Per Million: 11.0
FF:10175-103C4 60 years, female 11.8
FF:10161-103A8 76 years, female 10.2
Nucleus accumbens
Scaled Tags Per Million: 12.7
FF:10037-101F1 23-56 years, mixed 12.7
Putamen
Scaled Tags Per Million: 7.3
FF:10176-103C5 60 years, female 7.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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