HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:138.2 nTPM
HPA:138.2 nTPM
GTEx:101.6 nTPM
FANTOM5:32.7 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:90.2 nTPM
Allen mouse:21.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055135
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 138.2
Sample id Sample description nTPM
Hippocampus
nTPM: 126.3
2148 Female, age 91, left hemisphere 142.9
2621 Female, age 67, right hemisphere 134.7
1898 Male, age 80, left hemisphere 132.1
1855 Male, age 76, left hemisphere 121.4
1911 Female, age 85, right hemisphere 117.6
2529 Female, age 94, left hemisphere 108.9
Dentate gyrus
nTPM: 129.0
1927 Female, age 91, both hemispheres 151.4
2531 Female, age 67, both hemispheres 144.9
2528 Male, age 74, both hemispheres 129.9
2010 Male, age 76, both hemispheres 120.2
2246 Female, age 85, both hemispheres 116.2
2530 Female, age 94, left hemisphere 111.1
Entorhinal gyrus
nTPM: 117.9
2613 Female, age 94, left hemisphere 133.6
2686 Male, age 75, right hemisphere 126.0
2764 Male, age 80, right hemisphere 119.9
1787 Male, age 76, left hemisphere 110.6
1938 Female, age 85, left hemisphere 110.2
2117 Female, age 91, right hemisphere 107.2
Hippocampus, CA1
nTPM: 136.0
2749 Male, age 80, left hemisphere 164.4
2045 Male, age 76, both hemispheres 133.0
1873 Female, age 85, both hemispheres 130.7
2082 Female, age 91, right hemisphere 128.2
2527 Male, age 74, both hemispheres 123.4
Hippocampus, CA2
nTPM: 119.9
1892 Male, age 76, both hemispheres 131.5
1963 Male, age 80, left hemisphere 129.7
2113 Female, age 91, right hemisphere 120.4
2249 Male, age 74, both hemispheres 117.8
2437 Female, age 94, left hemisphere 114.2
1940 Female, age 85, left hemisphere 106.0
Hippocampus, CA3
nTPM: 138.2
2620 Female, age 94, left hemisphere 158.0
2861 Female, age 67, both hemispheres 154.9
2137 Male, age 80, left hemisphere 152.3
1867 Male, age 76, both hemispheres 129.7
2436 Male, age 74, both hemispheres 120.0
1891 Female, age 85, both hemispheres 114.3
Parahippocampal cortex
nTPM: 114.4
2693 Female, age 94, both hemispheres 125.3
2245 Female, age 91, both hemispheres 122.0
2622 Female, age 67, right hemisphere 121.4
1850 Male, age 80, both hemispheres 115.3
1990 Female, age 91, right hemisphere 112.7
2250 Female, age 67, right hemisphere 111.6
1933 Female, age 85, both hemispheres 111.4
2532 Female, age 72, left hemisphere 109.2
2692 Male, age 74, both hemispheres 108.1
2018 Male, age 76, both hemispheres 106.7
Perirhinal gyrus
nTPM: 120.2
1847 Female, age 91, left hemisphere 126.7
2521 Female, age 94, right hemisphere 125.8
1794 Male, age 80, right hemisphere 120.5
1841 Female, age 85, right hemisphere 117.6
2848 Male, age 76, right hemisphere 110.6
Subiculum
nTPM: 113.3
2729 Female, age 91, right hemisphere 129.0
1901 Male, age 80, both hemispheres 121.9
2619 Male, age 74, both hemispheres 111.4
1977 Female, age 85, both hemispheres 109.4
2042 Male, age 76, both hemispheres 104.8
2438 Female, age 94, left hemisphere 103.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.6
Samples: 197

Max nTPM: 282.2
Min nTPM: 8.8
Std nTPM: 48.3
Median nTPM: 96.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 282.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 282.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 223.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 213.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 193.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 188.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 187.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 180.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 179.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 178.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 178.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.7
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 31.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 32.0
Min nTPM: 20.8
Sample A Female 32.0
Sample B Female 29.9
Sample C Male 23.6
Sample D Male 20.8
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 41.4
Min nTPM: 31.0
Sample A Female 41.4
Sample B Female 31.6
Sample C Male 37.3
Sample D Male 31.0
Subiculum
nTPM: 26.3
Samples: 4

Max nTPM: 37.3
Min nTPM: 19.2
Sample A Female 37.3
Sample B Female 22.7
Sample C Male 26.1
Sample D Male 19.2
Ventral hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 43.7
Min nTPM: 19.4
Sample A Female 36.1
Sample B Female 19.4
Sample C Male 43.7
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.2
Samples: 4

Max nTPM: 94.2
Min nTPM: 85.0
Sample A Male 87.9
Sample B Male 94.2
Sample C Female 85.0
Sample D Female 93.7
Hippocampal formation
nTPM: 83.8
Samples: 4

Max nTPM: 89.7
Min nTPM: 78.0
Sample A Male 78.0
Sample B Male 83.3
Sample C Female 89.7
Sample D Female 84.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.3
67767446 Antisense, RP_040916_01_H06, Mouse strain C57BL/6J (56 days, male) 25.2
74658160 Antisense, RP_060220_02_C11, Mouse strain C57BL/6J (56 days, male) 17.4

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The Human Protein Atlas

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