HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:9.6 nTPM
HPA:9.6 nTPM
GTEx:23.8 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Pig:12.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023131
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.6
Sample id Sample description nTPM
Hippocampus
nTPM: 8.4
2621 Female, age 67, right hemisphere 11.3
1855 Male, age 76, left hemisphere 10.3
2148 Female, age 91, left hemisphere 8.3
2529 Female, age 94, left hemisphere 7.5
1911 Female, age 85, right hemisphere 7.4
1898 Male, age 80, left hemisphere 5.3
Dentate gyrus
nTPM: 6.8
2531 Female, age 67, both hemispheres 8.3
1927 Female, age 91, both hemispheres 7.1
2530 Female, age 94, left hemisphere 6.9
2528 Male, age 74, both hemispheres 6.7
2246 Female, age 85, both hemispheres 6.4
2010 Male, age 76, both hemispheres 5.7
Entorhinal gyrus
nTPM: 9.6
2686 Male, age 75, right hemisphere 13.2
2613 Female, age 94, left hemisphere 13.1
2764 Male, age 80, right hemisphere 9.6
1787 Male, age 76, left hemisphere 8.4
2117 Female, age 91, right hemisphere 7.1
1938 Female, age 85, left hemisphere 6.4
Hippocampus, CA1
nTPM: 7.0
2082 Female, age 91, right hemisphere 9.3
2749 Male, age 80, left hemisphere 8.8
2527 Male, age 74, both hemispheres 6.9
1873 Female, age 85, both hemispheres 5.2
2045 Male, age 76, both hemispheres 5.1
Hippocampus, CA2
nTPM: 7.8
2437 Female, age 94, left hemisphere 9.7
2113 Female, age 91, right hemisphere 8.9
1963 Male, age 80, left hemisphere 8.1
2249 Male, age 74, both hemispheres 7.0
1940 Female, age 85, left hemisphere 6.8
1892 Male, age 76, both hemispheres 6.3
Hippocampus, CA3
nTPM: 7.7
2620 Female, age 94, left hemisphere 9.6
2861 Female, age 67, both hemispheres 8.1
2137 Male, age 80, left hemisphere 7.7
1867 Male, age 76, both hemispheres 7.2
2436 Male, age 74, both hemispheres 7.1
1891 Female, age 85, both hemispheres 6.7
Parahippocampal cortex
nTPM: 7.8
2622 Female, age 67, right hemisphere 12.4
2693 Female, age 94, both hemispheres 8.8
2692 Male, age 74, both hemispheres 8.5
2532 Female, age 72, left hemisphere 8.3
1990 Female, age 91, right hemisphere 7.7
2245 Female, age 91, both hemispheres 7.4
1850 Male, age 80, both hemispheres 7.1
2018 Male, age 76, both hemispheres 6.7
2250 Female, age 67, right hemisphere 6.1
1933 Female, age 85, both hemispheres 5.3
Perirhinal gyrus
nTPM: 5.9
2848 Male, age 76, right hemisphere 8.3
1847 Female, age 91, left hemisphere 6.0
2521 Female, age 94, right hemisphere 5.7
1794 Male, age 80, right hemisphere 5.5
1841 Female, age 85, right hemisphere 4.1
Subiculum
nTPM: 7.1
2619 Male, age 74, both hemispheres 9.4
2042 Male, age 76, both hemispheres 8.5
2729 Female, age 91, right hemisphere 7.1
1901 Male, age 80, both hemispheres 6.5
1977 Female, age 85, both hemispheres 6.1
2438 Female, age 94, left hemisphere 5.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.8
Samples: 197

Max nTPM: 57.0
Min nTPM: 7.1
Std nTPM: 9.7
Median nTPM: 22.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 57.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 56.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 53.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 50.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 47.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 43.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 42.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 42.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 42.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 41.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10169-103B7 60 years, female 9.4
FF:10153-102I9 76 years, female 9.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.0
Sample A Female 12.1
Sample B Female 11.1
Sample C Male 10.8
Sample D Male 9.0
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.2
Sample A Female 12.0
Sample B Female 11.2
Sample C Male 16.1
Sample D Male 11.2
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.1
Sample A Female 15.0
Sample B Female 11.1
Sample C Male 12.3
Sample D Male 10.1
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.9
Min nTPM: 9.1
Sample A Female 10.3
Sample B Female 9.1
Sample C Male 14.9
Sample D Male 11.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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