HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:156.3 nTPM
HPA:156.3 nTPM
GTEx:165.5 nTPM
FANTOM5:352.7 Scaled Tags Per Million
Pig:85.5 nTPM
Mouse:351.4 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036287
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.3
Sample id Sample description nTPM
Hippocampus
nTPM: 135.1
1911 Female, age 85, right hemisphere 156.7
2529 Female, age 94, left hemisphere 145.4
2621 Female, age 67, right hemisphere 134.9
1898 Male, age 80, left hemisphere 130.1
2148 Female, age 91, left hemisphere 127.3
1855 Male, age 76, left hemisphere 116.3
Dentate gyrus
nTPM: 134.8
2530 Female, age 94, left hemisphere 154.2
2528 Male, age 74, both hemispheres 152.0
2010 Male, age 76, both hemispheres 143.1
2246 Female, age 85, both hemispheres 131.8
2531 Female, age 67, both hemispheres 116.8
1927 Female, age 91, both hemispheres 111.0
Entorhinal gyrus
nTPM: 129.6
2117 Female, age 91, right hemisphere 178.9
2764 Male, age 80, right hemisphere 141.1
1938 Female, age 85, left hemisphere 124.2
1787 Male, age 76, left hemisphere 120.3
2613 Female, age 94, left hemisphere 109.8
2686 Male, age 75, right hemisphere 103.0
Hippocampus, CA1
nTPM: 124.6
2527 Male, age 74, both hemispheres 139.8
2082 Female, age 91, right hemisphere 135.2
1873 Female, age 85, both hemispheres 131.8
2749 Male, age 80, left hemisphere 114.8
2045 Male, age 76, both hemispheres 101.3
Hippocampus, CA2
nTPM: 144.8
2249 Male, age 74, both hemispheres 179.0
1963 Male, age 80, left hemisphere 165.4
2113 Female, age 91, right hemisphere 140.5
1940 Female, age 85, left hemisphere 138.6
2437 Female, age 94, left hemisphere 137.2
1892 Male, age 76, both hemispheres 108.2
Hippocampus, CA3
nTPM: 123.8
1891 Female, age 85, both hemispheres 165.8
2436 Male, age 74, both hemispheres 136.2
1867 Male, age 76, both hemispheres 125.0
2620 Female, age 94, left hemisphere 111.6
2137 Male, age 80, left hemisphere 104.9
2861 Female, age 67, both hemispheres 99.3
Parahippocampal cortex
nTPM: 121.4
1990 Female, age 91, right hemisphere 137.5
2532 Female, age 72, left hemisphere 136.2
2018 Male, age 76, both hemispheres 133.8
2692 Male, age 74, both hemispheres 127.3
2245 Female, age 91, both hemispheres 124.8
1933 Female, age 85, both hemispheres 122.0
1850 Male, age 80, both hemispheres 115.9
2250 Female, age 67, right hemisphere 110.4
2693 Female, age 94, both hemispheres 105.6
2622 Female, age 67, right hemisphere 100.2
Perirhinal gyrus
nTPM: 109.2
2521 Female, age 94, right hemisphere 125.7
1847 Female, age 91, left hemisphere 106.0
2848 Male, age 76, right hemisphere 105.7
1841 Female, age 85, right hemisphere 104.8
1794 Male, age 80, right hemisphere 103.7
Subiculum
nTPM: 156.3
2042 Male, age 76, both hemispheres 183.0
1901 Male, age 80, both hemispheres 167.7
1977 Female, age 85, both hemispheres 164.3
2619 Male, age 74, both hemispheres 143.5
2438 Female, age 94, left hemisphere 141.9
2729 Female, age 91, right hemisphere 137.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 165.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 165.5
Samples: 197

Max nTPM: 556.2
Min nTPM: 30.9
Std nTPM: 103.9
Median nTPM: 135.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 556.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 533.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 481.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 451.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 401.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 394.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 391.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 390.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 377.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 375.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 374.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 352.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 352.7
FF:10153-102I9 76 years, female 445.9
FF:10169-103B7 60 years, female 259.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 85.5
Samples: 4

Max nTPM: 124.1
Min nTPM: 40.7
Sample A Female 116.7
Sample B Female 60.4
Sample C Male 124.1
Sample D Male 40.7
Entorhinal cortex
nTPM: 57.9
Samples: 4

Max nTPM: 70.5
Min nTPM: 40.4
Sample A Female 53.8
Sample B Female 67.0
Sample C Male 70.5
Sample D Male 40.4
Subiculum
nTPM: 57.4
Samples: 4

Max nTPM: 75.3
Min nTPM: 45.8
Sample A Female 58.6
Sample B Female 45.8
Sample C Male 50.0
Sample D Male 75.3
Ventral hippocampus
nTPM: 61.3
Samples: 4

Max nTPM: 69.3
Min nTPM: 42.3
Sample A Female 66.0
Sample B Female 42.3
Sample C Male 67.6
Sample D Male 69.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 351.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 351.4
Samples: 4

Max nTPM: 422.5
Min nTPM: 302.8
Sample A Male 339.0
Sample B Male 302.8
Sample C Female 422.5
Sample D Female 341.3
Hippocampal formation
nTPM: 312.2
Samples: 4

Max nTPM: 344.9
Min nTPM: 250.7
Sample A Male 344.9
Sample B Male 250.7
Sample C Female 311.0
Sample D Female 342.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
79903768 Antisense, RP_071204_02_B09, Mouse strain C57BL/6J (56 days, male) 4.6

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