HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.2 nTPM
HPA:71.2 nTPM
GTEx:43.3 nTPM
FANTOM5:53.7 Scaled Tags Per Million
Pig:2.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068473
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.2
Sample id Sample description nTPM
Hippocampus
nTPM: 71.2
2529 Female, age 94, left hemisphere 74.5
1898 Male, age 80, left hemisphere 71.4
2148 Female, age 91, left hemisphere 71.1
1855 Male, age 76, left hemisphere 70.2
2621 Female, age 67, right hemisphere 70.2
1911 Female, age 85, right hemisphere 69.6
Dentate gyrus
nTPM: 70.4
2530 Female, age 94, left hemisphere 78.4
2010 Male, age 76, both hemispheres 70.8
2531 Female, age 67, both hemispheres 70.1
2246 Female, age 85, both hemispheres 68.1
1927 Female, age 91, both hemispheres 67.8
2528 Male, age 74, both hemispheres 67.2
Entorhinal gyrus
nTPM: 71.1
2686 Male, age 75, right hemisphere 73.2
2613 Female, age 94, left hemisphere 71.7
2764 Male, age 80, right hemisphere 71.2
1938 Female, age 85, left hemisphere 70.8
2117 Female, age 91, right hemisphere 70.0
1787 Male, age 76, left hemisphere 69.5
Hippocampus, CA1
nTPM: 69.3
2749 Male, age 80, left hemisphere 71.6
2527 Male, age 74, both hemispheres 70.4
2045 Male, age 76, both hemispheres 69.3
1873 Female, age 85, both hemispheres 68.3
2082 Female, age 91, right hemisphere 66.9
Hippocampus, CA2
nTPM: 69.8
1963 Male, age 80, left hemisphere 71.9
2437 Female, age 94, left hemisphere 71.8
1892 Male, age 76, both hemispheres 70.1
1940 Female, age 85, left hemisphere 69.1
2113 Female, age 91, right hemisphere 68.7
2249 Male, age 74, both hemispheres 67.4
Hippocampus, CA3
nTPM: 69.6
2861 Female, age 67, both hemispheres 73.6
1891 Female, age 85, both hemispheres 70.8
1867 Male, age 76, both hemispheres 70.4
2137 Male, age 80, left hemisphere 70.1
2436 Male, age 74, both hemispheres 67.1
2620 Female, age 94, left hemisphere 65.5
Parahippocampal cortex
nTPM: 69.6
1933 Female, age 85, both hemispheres 72.3
2245 Female, age 91, both hemispheres 72.2
2532 Female, age 72, left hemisphere 70.3
2018 Male, age 76, both hemispheres 70.2
1850 Male, age 80, both hemispheres 69.8
2692 Male, age 74, both hemispheres 69.7
2622 Female, age 67, right hemisphere 69.2
2250 Female, age 67, right hemisphere 68.8
1990 Female, age 91, right hemisphere 67.7
2693 Female, age 94, both hemispheres 66.1
Perirhinal gyrus
nTPM: 68.8
2848 Male, age 76, right hemisphere 69.7
1847 Female, age 91, left hemisphere 68.9
1794 Male, age 80, right hemisphere 68.8
1841 Female, age 85, right hemisphere 68.7
2521 Female, age 94, right hemisphere 67.7
Subiculum
nTPM: 70.3
2042 Male, age 76, both hemispheres 72.5
1901 Male, age 80, both hemispheres 72.4
1977 Female, age 85, both hemispheres 71.2
2729 Female, age 91, right hemisphere 69.0
2619 Male, age 74, both hemispheres 68.4
2438 Female, age 94, left hemisphere 68.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.3
Samples: 197

Max nTPM: 85.0
Min nTPM: 17.7
Std nTPM: 13.3
Median nTPM: 40.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 82.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 77.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 75.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 74.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 74.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 72.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 71.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 71.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 70.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.7
FF:10153-102I9 76 years, female 58.3
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.3
Samples: 4

Max nTPM: 2.4
Min nTPM: 2.1
Sample A Female 2.2
Sample B Female 2.1
Sample C Male 2.3
Sample D Male 2.4
Entorhinal cortex
nTPM: 2.2
Samples: 4

Max nTPM: 2.3
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 2.1
Sample C Male 2.2
Sample D Male 2.3
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 2.2
Min nTPM: 2.0
Sample A Female 2.1
Sample B Female 2.1
Sample C Male 2.0
Sample D Male 2.2
Ventral hippocampus
nTPM: 2.3
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.8
Sample A Female 1.8
Sample B Female 2.3
Sample C Male 2.1
Sample D Male 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.