We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EEF1G
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • EEF1G
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:571.6 nTPM
FANTOM5:25.8 Scaled Tags Per Million
Pig:86.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040688Antibody HPA055316
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 571.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 571.6
Samples: 246

Max nTPM: 1393.2
Min nTPM: 283.6
Std nTPM: 129.1
Median nTPM: 556.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1393.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1135.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 925.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 910.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 898.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 887.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 884.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 883.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 878.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 876.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 838.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 795.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 792.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 783.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 771.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 753.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 752.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 749.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 748.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 743.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 742.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 736.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 731.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 725.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 722.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 722.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 709.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 702.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 701.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 701.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 697.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 697.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 694.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 692.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 691.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 689.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 685.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 680.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 679.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 676.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 676.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 676.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 665.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 662.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 662.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 659.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 658.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 654.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 653.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 647.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 643.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 642.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 639.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 637.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 636.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 636.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 635.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 635.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 633.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 630.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 630.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 629.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 629.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 629.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 626.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 622.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 621.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 620.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 619.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 619.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 617.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 616.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 615.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 611.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 607.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 606.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 606.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 605.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 604.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 602.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 600.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 598.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 595.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 595.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 595.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 594.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 591.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 591.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 588.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 588.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 588.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 587.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 587.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 586.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 586.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 586.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 586.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 585.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 584.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 583.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 582.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 582.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 581.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 581.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 578.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 578.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 575.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 574.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 574.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 572.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 565.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 564.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 564.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 563.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 561.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 561.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 560.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 558.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 558.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 557.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 557.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 556.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 556.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 555.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 555.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 553.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 548.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 548.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 545.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 544.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 542.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 542.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 542.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 540.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 539.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 538.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 538.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 535.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 535.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 535.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 532.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 529.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 528.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 528.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 527.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 526.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 526.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 526.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 526.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 526.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 526.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 525.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 523.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 522.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 516.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 516.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 514.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 511.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 510.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 507.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 506.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 505.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 505.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 504.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 504.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 503.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 503.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 499.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 499.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 498.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 497.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 497.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 495.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 494.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 494.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 493.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 491.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 490.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 488.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 488.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 485.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 481.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 481.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 479.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 477.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 476.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 476.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 475.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 475.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 475.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 475.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 474.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 474.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 473.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 473.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 473.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 470.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 470.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 468.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 467.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 467.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 466.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 461.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 460.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 460.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 459.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 457.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 456.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 456.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 454.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 454.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 453.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 452.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 451.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 451.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 447.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 446.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 445.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 444.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 442.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 442.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 442.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 440.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 435.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 435.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 432.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 428.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 427.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 426.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 425.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 425.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 423.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 421.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 419.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 417.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 417.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 415.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 413.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 411.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 401.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 392.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 388.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 386.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 373.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 351.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 283.6
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 25.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.8
FF:10164-103B2 76 years, female 25.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 86.0
Pig sample Sample description nTPM
Caudate
nTPM: 86.0
Samples: 4

Max nTPM: 94.7
Min nTPM: 73.0
Sample A Female 83.8
Sample B Female 92.4
Sample C Male 94.7
Sample D Male 73.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.