HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:103.9 nTPM
HPA:103.9 nTPM
GTEx:153.7 nTPM
FANTOM5:537.6 Scaled Tags Per Million
Mouse:340.4 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051122Antibody HPA051123
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.9
Sample id Sample description nTPM
Hippocampus
nTPM: 98.3
2529 Female, age 94, left hemisphere 107.4
1898 Male, age 80, left hemisphere 105.5
1855 Male, age 76, left hemisphere 98.2
2621 Female, age 67, right hemisphere 96.7
1911 Female, age 85, right hemisphere 94.3
2148 Female, age 91, left hemisphere 87.7
Dentate gyrus
nTPM: 93.2
1927 Female, age 91, both hemispheres 99.0
2010 Male, age 76, both hemispheres 96.4
2530 Female, age 94, left hemisphere 95.6
2531 Female, age 67, both hemispheres 94.3
2246 Female, age 85, both hemispheres 92.3
2528 Male, age 74, both hemispheres 81.6
Entorhinal gyrus
nTPM: 93.4
1938 Female, age 85, left hemisphere 104.0
1787 Male, age 76, left hemisphere 94.5
2686 Male, age 75, right hemisphere 92.9
2613 Female, age 94, left hemisphere 91.0
2764 Male, age 80, right hemisphere 89.9
2117 Female, age 91, right hemisphere 87.9
Hippocampus, CA1
nTPM: 97.7
2749 Male, age 80, left hemisphere 106.1
1873 Female, age 85, both hemispheres 101.3
2527 Male, age 74, both hemispheres 100.6
2045 Male, age 76, both hemispheres 97.7
2082 Female, age 91, right hemisphere 82.8
Hippocampus, CA2
nTPM: 94.3
1892 Male, age 76, both hemispheres 109.1
2437 Female, age 94, left hemisphere 95.5
1963 Male, age 80, left hemisphere 94.0
1940 Female, age 85, left hemisphere 92.9
2249 Male, age 74, both hemispheres 89.3
2113 Female, age 91, right hemisphere 85.0
Hippocampus, CA3
nTPM: 97.9
2137 Male, age 80, left hemisphere 106.4
1867 Male, age 76, both hemispheres 103.5
1891 Female, age 85, both hemispheres 99.3
2436 Male, age 74, both hemispheres 93.9
2861 Female, age 67, both hemispheres 92.8
2620 Female, age 94, left hemisphere 91.4
Parahippocampal cortex
nTPM: 97.8
2245 Female, age 91, both hemispheres 115.4
1850 Male, age 80, both hemispheres 109.6
1990 Female, age 91, right hemisphere 97.3
1933 Female, age 85, both hemispheres 97.1
2622 Female, age 67, right hemisphere 95.9
2532 Female, age 72, left hemisphere 95.4
2018 Male, age 76, both hemispheres 92.9
2250 Female, age 67, right hemisphere 92.3
2693 Female, age 94, both hemispheres 91.1
2692 Male, age 74, both hemispheres 90.7
Perirhinal gyrus
nTPM: 103.9
1841 Female, age 85, right hemisphere 108.9
1794 Male, age 80, right hemisphere 105.9
1847 Female, age 91, left hemisphere 103.4
2521 Female, age 94, right hemisphere 101.8
2848 Male, age 76, right hemisphere 99.8
Subiculum
nTPM: 96.6
2438 Female, age 94, left hemisphere 109.8
1901 Male, age 80, both hemispheres 100.4
1977 Female, age 85, both hemispheres 97.4
2619 Male, age 74, both hemispheres 95.0
2042 Male, age 76, both hemispheres 93.2
2729 Female, age 91, right hemisphere 83.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 153.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 153.7
Samples: 197

Max nTPM: 348.4
Min nTPM: 69.1
Std nTPM: 39.3
Median nTPM: 144.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 348.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 254.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 251.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 243.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 236.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 232.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 226.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 222.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 221.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 221.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 221.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 537.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 537.6
FF:10169-103B7 60 years, female 588.0
FF:10153-102I9 76 years, female 487.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 340.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 310.1
Samples: 4

Max nTPM: 320.4
Min nTPM: 295.2
Sample A Male 295.2
Sample B Male 317.8
Sample C Female 307.0
Sample D Female 320.4
Hippocampal formation
nTPM: 340.5
Samples: 4

Max nTPM: 354.5
Min nTPM: 302.3
Sample A Male 354.5
Sample B Male 352.5
Sample C Female 352.5
Sample D Female 302.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
68910957 Antisense, RP_041209_01_A01, Mouse strain C57BL/6J (56 days, male) 19.6
74583118 Antisense, RP_051214_02_F02, Mouse strain C57BL/6J (56 days, male) 19.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.