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AC002996.1
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  • AC002996.1
BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:46.2 nTPM
HPA:46.2 nTPM

THALAMUS - Annotated protein expression
Pending normal tissue analysis

THALAMUS - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 11.4
2497 Male, age 66, unknown 17.5
2032 Female, age 42, unknown 16.7
2396 Male, age 61, right hemisphere 0.0
Centromedial thalamic nucleus
nTPM: 8.9
2401 Male, age 76, right hemisphere 17.8
2279 Female, age 85, left hemisphere 0.0
Habenula
nTPM: 26.4
2276 Male, age 66, unknown 33.9
1957 Male, age 80, both hemispheres 29.7
2252 Male, age 62, unknown 23.3
2203 Male, age 61, left hemisphere 18.7
Lateral geniculate body
nTPM: 19.9
2857 Male, age 74, right hemisphere 49.6
2035 Female, age 72, unknown 24.4
2575 Female, age 94, right hemisphere 23.3
2399 Male, age 61, left hemisphere 22.8
2659 Male, age 66, unknown 11.0
2841 Male, age 80, both hemispheres 11.0
2106 Female, age 67, right hemisphere 9.1
1953 Male, age 62, unknown 7.8
Lateral thalamic nuclei
nTPM: 28.4
2573 Female, age 94, left hemisphere 56.6
2661 Female, age 72, unknown 25.2
2765 Female, age 67, both hemispheres 23.4
1903 Male, age 76, left hemisphere 23.3
2577 Male, age 74, both hemispheres 13.5
Medial dorsal thalamic nucleus
nTPM: 32.7
2572 Female, age 94, right hemisphere 103.4
2492 Male, age 75, right hemisphere 50.6
2498 Male, age 66, unknown 37.0
2026 Male, age 62, unknown 35.5
2576 Male, age 74, both hemispheres 34.9
1859 Male, age 76, both hemispheres 33.8
2402 Female, age 67, both hemispheres 29.6
2283 Male, age 80, right hemisphere 26.5
1810 Male, age 48, unknown 21.7
2039 Female, age 72, unknown 17.8
1971 Male, age 61, right hemisphere 13.3
1930 Female, age 42, unknown 12.9
2660 Female, age 72, unknown 7.7
Medial geniculate body
nTPM: 28.0
2650 Female, age 94, left hemisphere 54.8
2207 Male, age 80, right hemisphere 37.8
2217 Female, age 72, unknown 23.8
2657 Male, age 74, right hemisphere 22.1
2571 Male, age 75, right hemisphere 21.1
1811 Female, age 42, unknown 19.3
2049 Male, age 76, both hemispheres 17.1
Nucleus reuniens
nTPM: 14.1
2205 Male, age 80, left hemisphere 22.1
2212 Female, age 67, left hemisphere 20.1
2210 Female, age 85, left hemisphere 0.0
Nucleus rhomboideus
nTPM: 16.2
2206 Male, age 80, both hemispheres 35.2
2213 Female, age 67, left hemisphere 13.5
2280 Female, age 85, left hemisphere 0.0
Posterior thalamic nucleus
nTPM: 46.2
2649 Female, age 94, both hemispheres 73.4
2655 Male, age 74, right hemisphere 65.2
2495 Female, age 67, right hemisphere 32.0
2266 Male, age 76, right hemisphere 14.0
Pulvinar
nTPM: 27.4
2724 Male, age 74, right hemisphere 45.5
2499 Male, age 66, unknown 38.8
2582 Female, age 72, unknown 37.3
1932 Male, age 80, right hemisphere 36.4
1929 Male, age 48, unknown 24.4
2496 Female, age 67, right hemisphere 23.1
1972 Male, age 62, unknown 20.7
2214 Male, age 76, right hemisphere 20.1
1899 Female, age 42, unknown 13.9
2398 Male, age 61, left hemisphere 13.7
Subthalamic nucleus
nTPM: 13.7
2406 Female, age 72, unknown 22.1
2216 Male, age 48, unknown 21.2
2282 Male, age 61, both hemispheres 18.1
2779 Female, age 42, unknown 16.3
2056 Female, age 72, unknown 11.9
2124 Male, age 62, unknown 11.5
2275 Male, age 66, unknown 8.8
2658 Male, age 74, both hemispheres 0.1
Ventral posterolateral thalamic nucleus
nTPM: 18.8
2197 Male, age 80, both hemispheres 45.4
2570 Male, age 75, right hemisphere 38.7
2740 Male, age 76, right hemisphere 10.6
2397 Male, age 61, right hemisphere 8.7
2578 Male, age 74, both hemispheres 5.8
2581 Female, age 72, unknown 3.4
Ventral posteromedial thalamic nucleus
nTPM: 26.3
2758 Male, age 80, both hemispheres 42.0
2127 Male, age 76, right hemisphere 38.7
2281 Male, age 75, right hemisphere 32.7
2202 Male, age 61, left hemisphere 13.9
2653 Male, age 74, both hemispheres 4.0
Ventral thalamic nuclei
nTPM: 20.2
2204 Male, age 80, both hemispheres 40.7
1860 Male, age 76, both hemispheres 30.4
2285 Male, age 62, unknown 23.2
2291 Female, age 72, unknown 21.8
2580 Male, age 66, unknown 21.7
1845 Male, age 48, unknown 18.8
1912 Female, age 42, unknown 14.3
2652 Male, age 74, left hemisphere 7.6
2858 Female, age 72, unknown 3.7
Ventromedial nucleus
nTPM: 7.7
1982 Female, age 72, unknown 12.6
1822 Female, age 42, unknown 2.8
Zona incerta
nTPM: 7.8
2208 Male, age 80, right hemisphere 32.9
2663 Female, age 72, unknown 6.4
2215 Male, age 66, unknown 0.0
2403 Male, age 62, unknown 0.0
2822 Male, age 74, right hemisphere 0.0

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