COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Medium
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.2 nTPM
HPA:8.6 nTPM
GTEx:17.2 nTPM
FANTOM5:73.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA000637
Endothelial cells High
Glandular cells Medium
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 8.6
overview
Male, age 54 		Colon sample 67
nTPM: 8.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 4.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 1.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 13.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 12.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 13.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 17.2
Samples: 373

Max nTPM: 59.0
Min nTPM: 0.0
Std nTPM: 11.5
Median nTPM: 15.1
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 59.0
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 56.5
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 49.6
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 48.4
GTEX-18465-2726-SM-7LT9I 50-59 years, male 48.3
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 46.2
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 45.8
GTEX-1LVAN-2626-SM-CNPQF 50-59 years, female 45.1
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 44.8
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 42.1
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 41.2
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Colon - Transverse
Average nTPM: 7.9
Samples: 406

Max nTPM: 45.0
Min nTPM: 0.0
Std nTPM: 8.0
Median nTPM: 4.9
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 45.0
GTEX-1B996-2626-SM-73KZ1 60-69 years, male 42.3
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 39.8
GTEX-17MF6-2426-SM-7LTAM 40-49 years, male 33.2
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 33.0
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 32.9
GTEX-1N5O9-2726-SM-E76QH 60-69 years, male 29.8
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 29.4
GTEX-1PPGY-2826-SM-DTX9H 60-69 years, male 28.6
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 28.2
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 28.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 73.5
FF:10014-101C5 62,83,84 years, mixed 73.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.