HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:36.3 nTPM
HPA:36.3 nTPM
GTEx:20.0 nTPM
FANTOM5:9.0 Scaled Tags Per Million
Mouse:13.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 36.3
2621 Female, age 67, right hemisphere 37.5
1898 Male, age 80, left hemisphere 37.2
2529 Female, age 94, left hemisphere 36.6
2148 Female, age 91, left hemisphere 36.2
1855 Male, age 76, left hemisphere 35.6
1911 Female, age 85, right hemisphere 34.7
Dentate gyrus
nTPM: 35.1
2530 Female, age 94, left hemisphere 36.3
1927 Female, age 91, both hemispheres 36.2
2528 Male, age 74, both hemispheres 34.8
2246 Female, age 85, both hemispheres 34.6
2531 Female, age 67, both hemispheres 34.6
2010 Male, age 76, both hemispheres 33.9
Entorhinal gyrus
nTPM: 35.9
2613 Female, age 94, left hemisphere 37.4
1787 Male, age 76, left hemisphere 36.2
1938 Female, age 85, left hemisphere 35.8
2117 Female, age 91, right hemisphere 35.5
2764 Male, age 80, right hemisphere 35.4
2686 Male, age 75, right hemisphere 35.1
Hippocampus, CA1
nTPM: 34.5
2082 Female, age 91, right hemisphere 35.9
2749 Male, age 80, left hemisphere 35.6
1873 Female, age 85, both hemispheres 35.0
2527 Male, age 74, both hemispheres 34.3
2045 Male, age 76, both hemispheres 31.6
Hippocampus, CA2
nTPM: 35.4
2437 Female, age 94, left hemisphere 36.8
2249 Male, age 74, both hemispheres 36.3
1892 Male, age 76, both hemispheres 35.5
1963 Male, age 80, left hemisphere 35.5
1940 Female, age 85, left hemisphere 34.5
2113 Female, age 91, right hemisphere 33.6
Hippocampus, CA3
nTPM: 35.7
2620 Female, age 94, left hemisphere 40.0
2436 Male, age 74, both hemispheres 35.3
2861 Female, age 67, both hemispheres 35.2
1891 Female, age 85, both hemispheres 35.1
2137 Male, age 80, left hemisphere 34.9
1867 Male, age 76, both hemispheres 33.7
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 37.2
2622 Female, age 67, right hemisphere 35.6
2692 Male, age 74, both hemispheres 35.6
2532 Female, age 72, left hemisphere 34.9
2693 Female, age 94, both hemispheres 34.9
1990 Female, age 91, right hemisphere 34.8
1933 Female, age 85, both hemispheres 34.5
2018 Male, age 76, both hemispheres 34.4
2245 Female, age 91, both hemispheres 34.1
2250 Female, age 67, right hemisphere 33.6
Perirhinal gyrus
nTPM: 35.7
1794 Male, age 80, right hemisphere 38.0
1847 Female, age 91, left hemisphere 36.4
1841 Female, age 85, right hemisphere 36.0
2848 Male, age 76, right hemisphere 34.5
2521 Female, age 94, right hemisphere 33.4
Subiculum
nTPM: 35.1
2619 Male, age 74, both hemispheres 36.2
1901 Male, age 80, both hemispheres 35.6
2438 Female, age 94, left hemisphere 35.3
1977 Female, age 85, both hemispheres 34.8
2042 Male, age 76, both hemispheres 34.8
2729 Female, age 91, right hemisphere 34.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 54.9
Min nTPM: 7.9
Std nTPM: 7.4
Median nTPM: 18.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 54.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 45.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 45.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 44.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 42.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 39.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 38.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 35.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 33.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 32.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.0
FF:10153-102I9 76 years, female 9.7
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.8
Sample A Male 9.1
Sample B Male 8.8
Sample C Female 11.4
Sample D Female 9.6
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.8
Sample A Male 14.4
Sample B Male 12.8
Sample C Female 13.3
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71210753 Antisense, RP_050810_04_E04, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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