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RPL17
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1619.7 nTPM
HPA:856.8 nTPM
GTEx:1619.7 nTPM
FANTOM5:63.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043724Antibody HPA046385
Glandular cells HighHigh





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 856.8
overview
Male, age 65
Small intestine sample 232
nTPM: 1068.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 806.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 784.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 767.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1619.7
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1619.7
Samples: 187

Max nTPM: 3212.6
Min nTPM: 637.8
Std nTPM: 440.8
Median nTPM: 1590.9
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3212.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3036.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2946.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2755.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2695.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2589.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2582.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2571.1
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2511.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2511.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2492.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2492.3
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2367.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2293.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2287.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2255.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2234.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2208.2
GTEX-183FY-1626-SM-793D8 20-29 years, male 2206.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2177.8
GTEX-1192X-2526-SM-59868 50-59 years, male 2137.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2099.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2074.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2066.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2056.7
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2039.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2032.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2027.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2020.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1997.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1992.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1992.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1983.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1959.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1951.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1947.8
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1945.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1938.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1922.2
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1896.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1891.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1888.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1871.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1866.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1859.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1853.7
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1845.8
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1845.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1834.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1827.0
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1815.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1810.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1806.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1805.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1804.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1801.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1783.0
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1780.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1777.4
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1776.4
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1766.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1765.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1761.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1755.7
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1744.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1733.7
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1732.1
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1732.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1723.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1722.8
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1709.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1702.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1698.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1688.1
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1681.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1681.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1678.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 1676.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1665.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1661.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1648.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1646.2
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1640.9
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1634.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1632.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1630.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1628.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1623.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1617.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1616.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1616.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1607.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1602.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1590.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1581.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1573.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1565.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1558.4
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1546.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1543.4
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1521.1
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1518.6
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1507.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1506.0
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1505.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1492.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1482.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1472.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1472.7
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1465.9
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1465.8
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1464.8
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1464.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1459.6
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1456.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1451.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1451.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1442.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1436.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1433.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1413.7
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1403.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1403.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1402.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1400.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1391.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1378.2
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1375.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1372.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1358.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1353.1
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1352.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1349.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1349.6
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1344.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1335.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1334.7
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1331.4
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1328.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1320.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1309.8
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1307.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1306.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1281.6
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1273.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1273.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1267.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1252.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1251.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1246.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1216.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1215.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1215.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1208.5
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1193.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1189.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1185.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1183.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1183.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1183.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1182.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1177.1
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1165.7
GTEX-14PN3-2026-SM-68729 60-69 years, female 1159.9
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1140.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1137.1
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1110.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1109.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1102.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1082.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1073.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1067.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1048.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1041.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1030.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1023.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1010.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1008.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1003.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 998.0
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 989.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 967.7
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 959.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 949.2
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 891.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 865.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 637.8
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 63.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 63.5
FF:10024-101D6 15,40,85 years, mixed 63.5

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