HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:93.2 nTPM
HPA:93.2 nTPM
GTEx:69.8 nTPM
FANTOM5:85.0 Scaled Tags Per Million
Pig:46.8 nTPM
Mouse:187.2 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.2
Sample id Sample description nTPM
Hippocampus
nTPM: 88.3
1898 Male, age 80, left hemisphere 90.4
2621 Female, age 67, right hemisphere 89.7
2529 Female, age 94, left hemisphere 88.7
2148 Female, age 91, left hemisphere 88.2
1855 Male, age 76, left hemisphere 87.0
1911 Female, age 85, right hemisphere 85.8
Dentate gyrus
nTPM: 88.6
1927 Female, age 91, both hemispheres 92.3
2528 Male, age 74, both hemispheres 89.1
2010 Male, age 76, both hemispheres 88.4
2246 Female, age 85, both hemispheres 88.1
2530 Female, age 94, left hemisphere 87.4
2531 Female, age 67, both hemispheres 86.4
Entorhinal gyrus
nTPM: 89.1
1787 Male, age 76, left hemisphere 91.9
2764 Male, age 80, right hemisphere 91.0
1938 Female, age 85, left hemisphere 89.6
2613 Female, age 94, left hemisphere 88.5
2686 Male, age 75, right hemisphere 88.4
2117 Female, age 91, right hemisphere 85.1
Hippocampus, CA1
nTPM: 89.0
2749 Male, age 80, left hemisphere 92.5
2045 Male, age 76, both hemispheres 90.0
2527 Male, age 74, both hemispheres 88.4
1873 Female, age 85, both hemispheres 87.7
2082 Female, age 91, right hemisphere 86.6
Hippocampus, CA2
nTPM: 88.7
2249 Male, age 74, both hemispheres 92.8
1892 Male, age 76, both hemispheres 92.4
2437 Female, age 94, left hemisphere 87.9
2113 Female, age 91, right hemisphere 86.9
1940 Female, age 85, left hemisphere 86.3
1963 Male, age 80, left hemisphere 86.2
Hippocampus, CA3
nTPM: 89.3
2436 Male, age 74, both hemispheres 94.8
2620 Female, age 94, left hemisphere 90.5
2137 Male, age 80, left hemisphere 90.4
1867 Male, age 76, both hemispheres 89.9
1891 Female, age 85, both hemispheres 85.0
2861 Female, age 67, both hemispheres 84.9
Parahippocampal cortex
nTPM: 90.8
1850 Male, age 80, both hemispheres 94.9
2250 Female, age 67, right hemisphere 92.1
1933 Female, age 85, both hemispheres 91.6
2532 Female, age 72, left hemisphere 91.4
2693 Female, age 94, both hemispheres 91.2
2245 Female, age 91, both hemispheres 90.3
1990 Female, age 91, right hemisphere 89.5
2622 Female, age 67, right hemisphere 89.5
2692 Male, age 74, both hemispheres 89.3
2018 Male, age 76, both hemispheres 88.3
Perirhinal gyrus
nTPM: 93.2
1847 Female, age 91, left hemisphere 95.4
1841 Female, age 85, right hemisphere 94.4
1794 Male, age 80, right hemisphere 93.9
2848 Male, age 76, right hemisphere 91.3
2521 Female, age 94, right hemisphere 91.0
Subiculum
nTPM: 86.9
2619 Male, age 74, both hemispheres 90.3
1977 Female, age 85, both hemispheres 90.2
1901 Male, age 80, both hemispheres 86.1
2729 Female, age 91, right hemisphere 85.7
2042 Male, age 76, both hemispheres 85.0
2438 Female, age 94, left hemisphere 84.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.8
Samples: 197

Max nTPM: 206.8
Min nTPM: 32.7
Std nTPM: 20.0
Median nTPM: 67.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 206.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 130.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 127.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 121.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 116.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 106.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 105.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 103.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 103.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 102.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 102.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.0
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 71.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 61.8
Min nTPM: 30.9
Sample A Female 61.8
Sample B Female 41.5
Sample C Male 53.1
Sample D Male 30.9
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 45.8
Min nTPM: 34.6
Sample A Female 40.7
Sample B Female 44.2
Sample C Male 45.8
Sample D Male 34.6
Subiculum
nTPM: 44.3
Samples: 4

Max nTPM: 58.2
Min nTPM: 38.9
Sample A Female 58.2
Sample B Female 38.9
Sample C Male 39.6
Sample D Male 40.5
Ventral hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 51.3
Min nTPM: 32.7
Sample A Female 45.5
Sample B Female 32.7
Sample C Male 51.3
Sample D Male 44.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 187.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.5
Samples: 4

Max nTPM: 183.2
Min nTPM: 140.5
Sample A Male 158.6
Sample B Male 179.7
Sample C Female 183.2
Sample D Female 140.5
Hippocampal formation
nTPM: 187.2
Samples: 4

Max nTPM: 204.1
Min nTPM: 174.0
Sample A Male 204.1
Sample B Male 175.7
Sample C Female 195.1
Sample D Female 174.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
68744803 Antisense, RP_050208_01_F09, Mouse strain C57BL/6J (56 days, male) 5.5

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