HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:11.2 nTPM
FANTOM5:28.4 Scaled Tags Per Million
Pig:17.1 nTPM
Mouse:21.3 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
2529 Female, age 94, left hemisphere 12.9
1855 Male, age 76, left hemisphere 12.8
1911 Female, age 85, right hemisphere 12.7
2148 Female, age 91, left hemisphere 12.0
1898 Male, age 80, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.8
Dentate gyrus
nTPM: 12.1
2530 Female, age 94, left hemisphere 14.1
2246 Female, age 85, both hemispheres 13.0
2010 Male, age 76, both hemispheres 12.3
2528 Male, age 74, both hemispheres 12.3
1927 Female, age 91, both hemispheres 10.4
2531 Female, age 67, both hemispheres 10.4
Entorhinal gyrus
nTPM: 12.3
2117 Female, age 91, right hemisphere 15.1
1938 Female, age 85, left hemisphere 12.3
1787 Male, age 76, left hemisphere 12.2
2613 Female, age 94, left hemisphere 11.7
2686 Male, age 75, right hemisphere 11.2
2764 Male, age 80, right hemisphere 11.1
Hippocampus, CA1
nTPM: 11.7
2527 Male, age 74, both hemispheres 13.7
2082 Female, age 91, right hemisphere 12.1
1873 Female, age 85, both hemispheres 11.8
2045 Male, age 76, both hemispheres 11.7
2749 Male, age 80, left hemisphere 9.4
Hippocampus, CA2
nTPM: 11.5
2249 Male, age 74, both hemispheres 12.7
2113 Female, age 91, right hemisphere 12.6
1940 Female, age 85, left hemisphere 11.9
2437 Female, age 94, left hemisphere 11.5
1963 Male, age 80, left hemisphere 11.1
1892 Male, age 76, both hemispheres 9.5
Hippocampus, CA3
nTPM: 11.3
1891 Female, age 85, both hemispheres 13.0
2861 Female, age 67, both hemispheres 12.3
2436 Male, age 74, both hemispheres 12.2
2620 Female, age 94, left hemisphere 10.9
1867 Male, age 76, both hemispheres 10.8
2137 Male, age 80, left hemisphere 8.9
Parahippocampal cortex
nTPM: 12.0
2018 Male, age 76, both hemispheres 14.1
2250 Female, age 67, right hemisphere 13.8
2692 Male, age 74, both hemispheres 13.4
2622 Female, age 67, right hemisphere 12.1
1933 Female, age 85, both hemispheres 11.7
1990 Female, age 91, right hemisphere 11.7
2245 Female, age 91, both hemispheres 11.2
1850 Male, age 80, both hemispheres 10.8
2532 Female, age 72, left hemisphere 10.7
2693 Female, age 94, both hemispheres 10.6
Perirhinal gyrus
nTPM: 10.3
2848 Male, age 76, right hemisphere 11.4
1841 Female, age 85, right hemisphere 10.9
2521 Female, age 94, right hemisphere 10.3
1794 Male, age 80, right hemisphere 9.6
1847 Female, age 91, left hemisphere 9.5
Subiculum
nTPM: 12.9
2042 Male, age 76, both hemispheres 14.3
2729 Female, age 91, right hemisphere 13.8
2619 Male, age 74, both hemispheres 13.7
1977 Female, age 85, both hemispheres 12.8
2438 Female, age 94, left hemisphere 11.8
1901 Male, age 80, both hemispheres 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 19.7
Min nTPM: 5.5
Std nTPM: 2.7
Median nTPM: 10.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 19.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 18.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 17.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 17.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 17.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 17.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 16.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 16.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 16.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 16.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 15.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.4
FF:10153-102I9 76 years, female 34.8
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.6
Min nTPM: 9.5
Sample A Female 14.6
Sample B Female 11.1
Sample C Male 13.1
Sample D Male 9.5
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.3
Sample A Female 12.9
Sample B Female 12.4
Sample C Male 13.4
Sample D Male 11.3
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.1
Sample A Female 19.3
Sample B Female 17.4
Sample C Male 17.4
Sample D Male 14.1
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.2
Sample A Female 13.4
Sample B Female 12.8
Sample C Male 17.3
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.7
Min nTPM: 16.6
Sample A Male 17.1
Sample B Male 16.6
Sample C Female 19.7
Sample D Female 18.7
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.1
Sample A Male 21.8
Sample B Male 22.5
Sample C Female 22.0
Sample D Female 19.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.