HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.6 nTPM
HPA:31.6 nTPM
GTEx:22.6 nTPM
FANTOM5:8.1 Scaled Tags Per Million
Pig:60.8 nTPM
Mouse:0.6 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.6
Sample id Sample description nTPM
Hippocampus
nTPM: 30.1
1855 Male, age 76, left hemisphere 44.9
2529 Female, age 94, left hemisphere 32.9
1898 Male, age 80, left hemisphere 30.1
1911 Female, age 85, right hemisphere 28.5
2621 Female, age 67, right hemisphere 24.3
2148 Female, age 91, left hemisphere 20.0
Dentate gyrus
nTPM: 22.8
2010 Male, age 76, both hemispheres 28.4
2530 Female, age 94, left hemisphere 26.1
2528 Male, age 74, both hemispheres 24.5
2531 Female, age 67, both hemispheres 24.4
2246 Female, age 85, both hemispheres 20.6
1927 Female, age 91, both hemispheres 12.8
Entorhinal gyrus
nTPM: 23.8
2117 Female, age 91, right hemisphere 38.0
1787 Male, age 76, left hemisphere 26.9
2686 Male, age 75, right hemisphere 23.3
1938 Female, age 85, left hemisphere 19.6
2764 Male, age 80, right hemisphere 19.5
2613 Female, age 94, left hemisphere 15.5
Hippocampus, CA1
nTPM: 31.6
2045 Male, age 76, both hemispheres 49.1
2749 Male, age 80, left hemisphere 36.3
2082 Female, age 91, right hemisphere 33.4
1873 Female, age 85, both hemispheres 21.8
2527 Male, age 74, both hemispheres 17.4
Hippocampus, CA2
nTPM: 25.3
1940 Female, age 85, left hemisphere 29.8
2113 Female, age 91, right hemisphere 27.0
2249 Male, age 74, both hemispheres 25.6
1963 Male, age 80, left hemisphere 24.2
1892 Male, age 76, both hemispheres 23.9
2437 Female, age 94, left hemisphere 21.0
Hippocampus, CA3
nTPM: 25.1
2436 Male, age 74, both hemispheres 33.6
2137 Male, age 80, left hemisphere 30.8
1891 Female, age 85, both hemispheres 24.8
2620 Female, age 94, left hemisphere 22.1
1867 Male, age 76, both hemispheres 20.7
2861 Female, age 67, both hemispheres 18.9
Parahippocampal cortex
nTPM: 17.4
2018 Male, age 76, both hemispheres 32.7
2250 Female, age 67, right hemisphere 30.2
1933 Female, age 85, both hemispheres 20.6
2245 Female, age 91, both hemispheres 19.3
1990 Female, age 91, right hemisphere 18.4
2532 Female, age 72, left hemisphere 15.0
2622 Female, age 67, right hemisphere 10.8
2693 Female, age 94, both hemispheres 9.7
1850 Male, age 80, both hemispheres 9.5
2692 Male, age 74, both hemispheres 7.9
Perirhinal gyrus
nTPM: 18.5
1794 Male, age 80, right hemisphere 20.1
1847 Female, age 91, left hemisphere 19.2
2848 Male, age 76, right hemisphere 19.1
1841 Female, age 85, right hemisphere 18.2
2521 Female, age 94, right hemisphere 15.9
Subiculum
nTPM: 24.4
2042 Male, age 76, both hemispheres 30.3
2729 Female, age 91, right hemisphere 29.1
1901 Male, age 80, both hemispheres 25.8
2619 Male, age 74, both hemispheres 22.5
1977 Female, age 85, both hemispheres 19.5
2438 Female, age 94, left hemisphere 19.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 456.8
Min nTPM: 0.0
Std nTPM: 35.3
Median nTPM: 15.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 456.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 87.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 78.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 76.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 73.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 72.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 66.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 61.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 56.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.1
FF:10169-103B7 60 years, female 11.5
FF:10153-102I9 76 years, female 4.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 84.3
Min nTPM: 52.0
Sample A Female 84.3
Sample B Female 53.2
Sample C Male 52.0
Sample D Male 53.7
Entorhinal cortex
nTPM: 55.4
Samples: 4

Max nTPM: 64.6
Min nTPM: 46.7
Sample A Female 60.5
Sample B Female 64.6
Sample C Male 49.7
Sample D Male 46.7
Subiculum
nTPM: 45.4
Samples: 4

Max nTPM: 65.1
Min nTPM: 33.8
Sample A Female 65.1
Sample B Female 42.2
Sample C Male 33.8
Sample D Male 40.5
Ventral hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 63.3
Min nTPM: 45.1
Sample A Female 60.3
Sample B Female 45.1
Sample C Male 63.3
Sample D Male 46.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.5
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.0
Sample A Male 1.1
Sample B Male 0.0
Sample C Female 1.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.0
Sample A Male 1.1
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 1.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
72129296 Antisense, RP_051017_03_F12, Mouse strain C57BL/6J (56 days, male) 16.4
69169367 Antisense, RP_050321_03_D08, Mouse strain C57BL/6J (56 days, male) 15.2

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The Human Protein Atlas

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