COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.2 nTPM
HPA:6.6 nTPM
GTEx:10.2 nTPM
FANTOM5:0.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA038748Antibody HPA038752Antibody HPA042595Antibody HPA043105Antibody HPA043692Antibody HPA044023Antibody HPA046971Antibody HPA058050
Endothelial cells LowMediumHighNot detectedNot detectedNot detectedLowNot detected
Glandular cells HighNot detectedNot detectedNot detectedNot detectedLowNot detectedMedium
Peripheral nerve/ganglion -Not detected-Not detectedNot detectedLowLowMedium











COLON - HPA RNA-seqi
Average nTPM 6.6
overview
Male, age 54 		Colon sample 67
nTPM: 5.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 1.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 5.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 4.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 10.2
Samples: 373

Max nTPM: 26.6
Min nTPM: 1.1
Std nTPM: 4.1
Median nTPM: 9.8
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 26.6
GTEX-1QP28-2226-SM-DTX8C 50-59 years, female 25.1
GTEX-1S831-1726-SM-EWROJ 20-29 years, male 23.4
GTEX-1QP29-2526-SM-E6CQ3 50-59 years, male 21.8
GTEX-1C2JI-1726-SM-73KUW 50-59 years, male 20.9
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 20.7
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 20.7
GTEX-15DYW-2426-SM-7KUG8 60-69 years, female 20.1
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 19.8
GTEX-1ICG6-2226-SM-B2LY7 70-79 years, female 19.8
GTEX-1GN73-2726-SM-9WYUB 60-69 years, male 19.5
Show allShow less
Colon - Transverse
Average nTPM: 8.3
Samples: 406

Max nTPM: 23.2
Min nTPM: 1.7
Std nTPM: 3.5
Median nTPM: 7.7
GTEX-1GMR3-2826-SM-9WPOG 40-49 years, male 23.2
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 22.4
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 21.7
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 19.4
GTEX-11GSP-1626-SM-5986N 60-69 years, female 19.3
GTEX-14H4A-1926-SM-5ZZWN 40-49 years, female 18.9
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 17.1
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 16.8
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 16.8
GTEX-1A3MV-1126-SM-718BS 30-39 years, male 16.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 16.1
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 0.1
FF:10014-101C5 62,83,84 years, mixed 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.