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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 4.2
Min nTPM: 0.0
Std nTPM: 0.8
Median nTPM: 0.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
4.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
3.7
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
3.5
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
3.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2.8
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
2.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
2.6
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
2.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
2.1
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
2.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
2.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
2.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
2.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
2.0
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
2.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
2.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
2.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
1.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
1.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1.9
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
1.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
1.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
1.5
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
1.5
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
1.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
1.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
1.3
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
1.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
1.3
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
1.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
1.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
1.0
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
1.0
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
1.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
0.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
0.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
0.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
0.9
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
0.9
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
0.9
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
0.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
0.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
0.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
0.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
0.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
0.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
0.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
0.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
0.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
0.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
0.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
0.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
0.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
0.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
0.7
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
0.7
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
0.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
0.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
0.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
0.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
0.6
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
0.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
0.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
0.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
0.6
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
0.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
0.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
0.6
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
0.5
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
0.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
0.5
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
0.5
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
0.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
0.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
0.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
0.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
0.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
0.4
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
0.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
0.4
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
0.4
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
0.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
0.4
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
0.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
0.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
0.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
0.3
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
0.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
0.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
0.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
0.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
0.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
0.3
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
0.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
0.3
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
0.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
0.3
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
0.3
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
0.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
0.3
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
0.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
0.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
0.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
0.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
0.2
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
0.2
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
0.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
0.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
0.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
0.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
0.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
0.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
0.1
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
0.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
0.1
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
0.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
0.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
0.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
0.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
0.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
0.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
0.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
0.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
0.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
0.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
0.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
0.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
0.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
0.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
0.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
0.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
0.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
0.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
0.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
0.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
0.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
0.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
0.0
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
0.0
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
0.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
0.0
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
0.0
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
0.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
0.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
0.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
0.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
0.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
0.0
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
0.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
0.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
0.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
0.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
0.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
0.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
0.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
0.0
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
0.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
0.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
0.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
0.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
0.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
0.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
0.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
0.0
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
0.0
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
0.0
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
0.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
0.0
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
0.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
0.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
0.0
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
0.0
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
0.0
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
0.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
0.0
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
0.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
0.0
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
0.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
0.0
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
0.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
0.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
0.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
0.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
0.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.