HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:90.7 nTPM
HPA:90.7 nTPM
GTEx:62.4 nTPM
FANTOM5:73.0 Scaled Tags Per Million
Pig:60.1 nTPM
Mouse:55.9 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.7
Sample id Sample description nTPM
Hippocampus
nTPM: 71.3
2621 Female, age 67, right hemisphere 76.2
1898 Male, age 80, left hemisphere 73.9
2148 Female, age 91, left hemisphere 73.7
2529 Female, age 94, left hemisphere 72.0
1855 Male, age 76, left hemisphere 68.1
1911 Female, age 85, right hemisphere 63.6
Dentate gyrus
nTPM: 71.2
2531 Female, age 67, both hemispheres 77.1
2246 Female, age 85, both hemispheres 74.3
1927 Female, age 91, both hemispheres 73.6
2528 Male, age 74, both hemispheres 71.8
2530 Female, age 94, left hemisphere 67.4
2010 Male, age 76, both hemispheres 63.1
Entorhinal gyrus
nTPM: 77.4
2613 Female, age 94, left hemisphere 87.7
1938 Female, age 85, left hemisphere 83.3
1787 Male, age 76, left hemisphere 81.6
2764 Male, age 80, right hemisphere 80.2
2686 Male, age 75, right hemisphere 66.3
2117 Female, age 91, right hemisphere 65.2
Hippocampus, CA1
nTPM: 73.6
2749 Male, age 80, left hemisphere 82.9
2527 Male, age 74, both hemispheres 76.1
2082 Female, age 91, right hemisphere 71.1
1873 Female, age 85, both hemispheres 70.7
2045 Male, age 76, both hemispheres 67.3
Hippocampus, CA2
nTPM: 72.2
1963 Male, age 80, left hemisphere 78.2
2437 Female, age 94, left hemisphere 76.3
1892 Male, age 76, both hemispheres 74.7
2113 Female, age 91, right hemisphere 71.9
1940 Female, age 85, left hemisphere 66.0
2249 Male, age 74, both hemispheres 65.9
Hippocampus, CA3
nTPM: 73.5
2137 Male, age 80, left hemisphere 87.7
2620 Female, age 94, left hemisphere 77.5
2861 Female, age 67, both hemispheres 73.7
2436 Male, age 74, both hemispheres 68.6
1867 Male, age 76, both hemispheres 67.7
1891 Female, age 85, both hemispheres 66.1
Parahippocampal cortex
nTPM: 78.4
1850 Male, age 80, both hemispheres 89.8
2532 Female, age 72, left hemisphere 83.9
2245 Female, age 91, both hemispheres 82.9
2622 Female, age 67, right hemisphere 80.5
2693 Female, age 94, both hemispheres 79.6
1933 Female, age 85, both hemispheres 77.1
2250 Female, age 67, right hemisphere 75.8
1990 Female, age 91, right hemisphere 75.7
2692 Male, age 74, both hemispheres 73.1
2018 Male, age 76, both hemispheres 65.7
Perirhinal gyrus
nTPM: 90.7
2521 Female, age 94, right hemisphere 93.8
1847 Female, age 91, left hemisphere 91.8
1794 Male, age 80, right hemisphere 91.0
2848 Male, age 76, right hemisphere 88.6
1841 Female, age 85, right hemisphere 88.1
Subiculum
nTPM: 70.0
1977 Female, age 85, both hemispheres 76.6
2438 Female, age 94, left hemisphere 75.2
2619 Male, age 74, both hemispheres 74.8
2729 Female, age 91, right hemisphere 68.2
1901 Male, age 80, both hemispheres 66.4
2042 Male, age 76, both hemispheres 59.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.4
Samples: 197

Max nTPM: 126.9
Min nTPM: 12.4
Std nTPM: 17.8
Median nTPM: 62.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 126.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 115.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 108.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 107.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 106.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 103.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 97.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 97.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 97.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 96.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 95.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.0
FF:10153-102I9 76 years, female 82.2
FF:10169-103B7 60 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 71.5
Min nTPM: 43.5
Sample A Female 71.5
Sample B Female 64.3
Sample C Male 58.7
Sample D Male 43.5
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 66.6
Min nTPM: 54.1
Sample A Female 63.3
Sample B Female 54.1
Sample C Male 66.6
Sample D Male 56.5
Subiculum
nTPM: 60.0
Samples: 4

Max nTPM: 74.0
Min nTPM: 49.7
Sample A Female 74.0
Sample B Female 54.3
Sample C Male 61.9
Sample D Male 49.7
Ventral hippocampus
nTPM: 59.1
Samples: 4

Max nTPM: 74.7
Min nTPM: 43.4
Sample A Female 49.3
Sample B Female 43.4
Sample C Male 74.7
Sample D Male 68.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.9
Samples: 4

Max nTPM: 64.3
Min nTPM: 52.4
Sample A Male 52.4
Sample B Male 53.5
Sample C Female 53.2
Sample D Female 64.3
Hippocampal formation
nTPM: 52.8
Samples: 4

Max nTPM: 56.5
Min nTPM: 46.8
Sample A Male 52.1
Sample B Male 56.5
Sample C Female 55.7
Sample D Female 46.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
69012687 Antisense, RP_050309_01_C06, Mouse strain C57BL/6J (56 days, male) 12.1

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