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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 189.2
Min nTPM: 58.6
Std nTPM: 23.6
Median nTPM:
322_1
76 years, male
189.2
447_1
81 years, male
183.2
6_1
73 years, female
170.6
347_1
72 years, male
158.5
319_1
81 years, male
156.4
2_1
77 years, female
154.9
139_1
64 years, female
153.0
375_1
74 years, female
152.3
495_1
57 years, female
151.4
237_1
82 years, male
150.8
35_1
74 years, female
150.0
384_1
83 years, male
150.0
172_1
72 years, female
141.2
316_1
62 years, male
140.6
41_1
94 years, female
138.4
218_1
71 years, female
136.5
307_1
66 years, female
136.5
243_1
75 years, male
133.5
115_1
83 years, male
130.8
153_1
70 years, female
130.0
354_1
81 years, female
127.5
389_1
86 years, female
127.0
311_1
78 years, male
125.0
396_1
62 years, male
124.2
229_1
69 years, female
123.7
379_1
60 years, male
122.0
376_1
75 years, female
121.9
394_1
75 years, female
121.8
320_1
89 years, female
121.3
246_1
77 years, male
120.6
313_1
79 years, female
120.6
355_1
70 years, female
119.8
348_1
84 years, male
119.2
99_1
64 years, male
119.1
526_1
61 years, male
117.8
499_1
55 years, female
117.7
42_1
85 years, male
117.4
286_1
68 years, female
117.3
126_1
63 years, male
117.2
318_1
68 years, male
117.1
350_1
84 years, female
115.5
349_1
83 years, male
115.1
415_1
77 years, female
114.6
386_1
76 years, male
114.4
145_1
84 years, male
113.7
377_1
82 years, female
113.3
119_1
70 years, female
112.3
142_1
61 years, female
112.3
18_1
88 years, male
111.6
490_1
67 years, female
111.4
9_1
66 years, female
110.0
405_1
91 years, male
109.7
189_1
76 years, male
109.3
356_1
87 years, female
109.0
324_1
76 years, male
108.9
321_1
62 years, female
108.7
414_1
84 years, female
108.4
162_1
79 years, female
108.3
315_1
62 years, female
107.5
251_1
78 years, male
107.4
293_1
68 years, female
107.3
173_1
67 years, male
106.7
468_1
89 years, male
106.1
32_1
67 years, male
105.7
404_1
82 years, female
105.6
120_1
70 years, female
105.2
425_1
59 years, female
105.2
109_1
81 years, female
105.1
480_1
63 years, male
104.8
217_1
76 years, male
104.1
177_1
74 years, male
103.5
266_1
85 years, male
103.5
265_1
87 years, male
103.1
17_1
71 years, male
102.8
491_1
89 years, female
102.8
117_1
61 years, male
102.6
335_1
73 years, female
101.5
353_1
82 years, female
98.5
4_1
88 years, female
97.2
291_1
76 years, male
97.0
351_1
91 years, male
97.0
352_1
62 years, male
97.0
292_1
71 years, male
94.5
163_1
78 years, male
93.1
517_1
88 years, male
92.8
317_1
60 years, male
92.2
518_1
75 years, female
91.7
503_1
68 years, male
91.2
254_1
77 years, female
91.0
466_1
57 years, female
90.3
406_1
79 years, male
88.0
89_1
63 years, male
87.3
149_1
88 years, male
86.1
43_1
64 years, female
85.2
81_1
67 years, male
85.2
452_1
88 years, female
84.7
137_1
83 years, male
83.6
314_1
67 years, male
82.0
264_1
73 years, female
78.0
288_1
66 years, female
76.8
295_1
61 years, female
76.7
413_1
59 years, female
74.9
506_1
65 years, male
72.2
308_1
70 years, female
69.6
501_1
88 years, male
58.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
