HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.1 nTPM
HPA:24.1 nTPM
GTEx:25.4 nTPM
FANTOM5:64.8 Scaled Tags Per Million
Pig:29.6 nTPM
Mouse:59.9 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018914
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1898 Male, age 80, left hemisphere 25.0
2621 Female, age 67, right hemisphere 21.7
2148 Female, age 91, left hemisphere 21.6
1855 Male, age 76, left hemisphere 21.2
1911 Female, age 85, right hemisphere 20.6
2529 Female, age 94, left hemisphere 19.6
Dentate gyrus
nTPM: 21.3
2010 Male, age 76, both hemispheres 22.3
2530 Female, age 94, left hemisphere 21.8
2528 Male, age 74, both hemispheres 21.5
1927 Female, age 91, both hemispheres 21.4
2246 Female, age 85, both hemispheres 20.5
2531 Female, age 67, both hemispheres 20.5
Entorhinal gyrus
nTPM: 20.7
1938 Female, age 85, left hemisphere 22.9
2764 Male, age 80, right hemisphere 21.2
1787 Male, age 76, left hemisphere 20.9
2117 Female, age 91, right hemisphere 20.8
2686 Male, age 75, right hemisphere 20.5
2613 Female, age 94, left hemisphere 18.1
Hippocampus, CA1
nTPM: 21.8
2749 Male, age 80, left hemisphere 24.7
1873 Female, age 85, both hemispheres 22.7
2527 Male, age 74, both hemispheres 22.4
2045 Male, age 76, both hemispheres 19.8
2082 Female, age 91, right hemisphere 19.3
Hippocampus, CA2
nTPM: 22.4
1963 Male, age 80, left hemisphere 23.6
2249 Male, age 74, both hemispheres 23.5
1892 Male, age 76, both hemispheres 22.9
1940 Female, age 85, left hemisphere 22.5
2113 Female, age 91, right hemisphere 21.4
2437 Female, age 94, left hemisphere 20.6
Hippocampus, CA3
nTPM: 21.3
2436 Male, age 74, both hemispheres 23.8
1891 Female, age 85, both hemispheres 22.4
1867 Male, age 76, both hemispheres 21.6
2137 Male, age 80, left hemisphere 21.2
2620 Female, age 94, left hemisphere 20.1
2861 Female, age 67, both hemispheres 18.4
Parahippocampal cortex
nTPM: 21.9
1850 Male, age 80, both hemispheres 26.4
1990 Female, age 91, right hemisphere 22.9
1933 Female, age 85, both hemispheres 22.6
2693 Female, age 94, both hemispheres 22.0
2692 Male, age 74, both hemispheres 21.7
2018 Male, age 76, both hemispheres 21.3
2245 Female, age 91, both hemispheres 21.3
2532 Female, age 72, left hemisphere 21.2
2250 Female, age 67, right hemisphere 21.0
2622 Female, age 67, right hemisphere 18.8
Perirhinal gyrus
nTPM: 24.1
1841 Female, age 85, right hemisphere 25.5
1847 Female, age 91, left hemisphere 25.4
1794 Male, age 80, right hemisphere 25.1
2521 Female, age 94, right hemisphere 23.9
2848 Male, age 76, right hemisphere 20.7
Subiculum
nTPM: 21.7
2619 Male, age 74, both hemispheres 22.8
2438 Female, age 94, left hemisphere 22.3
1977 Female, age 85, both hemispheres 21.7
2042 Male, age 76, both hemispheres 21.5
1901 Male, age 80, both hemispheres 21.4
2729 Female, age 91, right hemisphere 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 44.6
Min nTPM: 16.4
Std nTPM: 4.1
Median nTPM: 25.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 44.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 34.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 34.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 34.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 33.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 33.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 32.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.8
FF:10153-102I9 76 years, female 71.1
FF:10169-103B7 60 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 34.2
Min nTPM: 23.5
Sample A Female 34.2
Sample B Female 28.2
Sample C Male 32.3
Sample D Male 23.5
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 29.8
Min nTPM: 25.2
Sample A Female 27.6
Sample B Female 29.8
Sample C Male 27.5
Sample D Male 25.2
Subiculum
nTPM: 27.6
Samples: 4

Max nTPM: 34.6
Min nTPM: 24.4
Sample A Female 34.6
Sample B Female 24.4
Sample C Male 25.5
Sample D Male 25.9
Ventral hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 28.1
Min nTPM: 22.7
Sample A Female 26.7
Sample B Female 22.8
Sample C Male 22.7
Sample D Male 28.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 62.9
Min nTPM: 55.0
Sample A Male 57.7
Sample B Male 62.9
Sample C Female 55.0
Sample D Female 56.7
Hippocampal formation
nTPM: 60.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 55.3
Sample A Male 67.4
Sample B Male 60.3
Sample C Female 56.8
Sample D Female 55.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
70303498 Antisense, RP_050609_01_E12, Mouse strain C57BL/6J (56 days, male) 12.0

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