BASAL GANGLIA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:0.1 nTPM
HPA:0.1 nTPM
GTEx:0.0 nTPM
FANTOM5:12.5 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.0
1857 Female, age 85, left hemisphere 0.2
1781 Male, age 74, unknown 0.0
1854 Male, age 80, left hemisphere 0.0
2288 Male, age 75, left hemisphere 0.0
2289 Male, age 61, right hemisphere 0.0
2290 Female, age 72, unknown 0.0
2481 Female, age 94, left hemisphere 0.0
2846 Female, age 79, unknown 0.0
Claustrum
nTPM: 0.1
2198 Male, age 80, both hemispheres 0.4
1956 Male, age 74, unknown 0.2
2491 Male, age 75, both hemispheres 0.1
2196 Female, age 79, unknown 0.0
2284 Female, age 91, both hemispheres 0.0
2292 Female, age 85, both hemispheres 0.0
2392 Female, age 94, both hemispheres 0.0
2568 Male, age 61, both hemispheres 0.0
2645 Female, age 72, unknown 0.0
Globus pallidus, externus
nTPM: 0.0
2646 Male, age 61, right hemisphere 0.1
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2567 Female, age 72, unknown 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.1
2037 Male, age 80, right hemisphere 0.4
2566 Female, age 72, unknown 0.2
1818 Male, age 74, unknown 0.0
2111 Female, age 85, right hemisphere 0.0
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 0.0
2732 Male, age 80, right hemisphere 0.1
1783 Male, age 74, unknown 0.0
1806 Female, age 85, left hemisphere 0.0
1856 Female, age 91, right hemisphere 0.0
2286 Male, age 75, left hemisphere 0.0
2391 Female, age 94, left hemisphere 0.0
2698 Female, age 72, unknown 0.0
2824 Male, age 61, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 0.0
2393 Male, age 80, right hemisphere 0.1
2484 Female, age 94, left hemisphere 0.0
2569 Male, age 61, both hemispheres 0.0
2821 Male, age 75, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 0.1
1812 Female, age 91, both hemispheres 0.2
1979 Male, age 74, unknown 0.2
2029 Male, age 61, right hemisphere 0.1
2195 Female, age 85, both hemispheres 0.0
2775 Male, age 80, right hemisphere 0.0
Olfactory tubercle
nTPM: 0.0
2487 Female, age 94, left hemisphere 0.1
1846 Male, age 80, right hemisphere 0.0
1998 Female, age 91, both hemispheres 0.0
2856 Male, age 75, right hemisphere 0.0
Putamen
nTPM: 0.0
1829 Male, age 74, unknown 0.0
1838 Male, age 80, right hemisphere 0.0
1937 Female, age 91, right hemisphere 0.0
2466 Female, age 79, unknown 0.0
2482 Female, age 94, left hemisphere 0.0
2489 Female, age 72, unknown 0.0
2647 Male, age 75, left hemisphere 0.0
Septal nuclei
nTPM: 0.1
2009 Female, age 91, both hemispheres 0.2
2031 Female, age 72, unknown 0.2
2199 Male, age 80, right hemisphere 0.1
2394 Male, age 61, left hemisphere 0.1
1960 Male, age 74, unknown 0.0
2059 Female, age 85, both hemispheres 0.0
2629 Female, age 94, right hemisphere 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.0
Samples: 246

Max nTPM: 0.5
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM:
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 0.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 0.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 0.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 0.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 0.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 0.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 0.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 0.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 0.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 0.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 0.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.0
Samples: 246

Max nTPM: 0.7
Min nTPM: 0.0
Std nTPM: 0.0
Median nTPM:
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 0.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 0.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 0.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 0.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 0.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 0.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 0.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 0.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 0.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 0.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 0.2
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Brain - Putamen (basal ganglia)
Average nTPM: 0.0
Samples: 205

Max nTPM: 0.9
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 0.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 0.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 0.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 0.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 0.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 0.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 0.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 0.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 0.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 0.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 0.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 7.9
FF:10164-103B2 76 years, female 7.9
Globus pallidus
Scaled Tags Per Million: 5.0
FF:10175-103C4 60 years, female 5.5
FF:10161-103A8 76 years, female 4.5
Nucleus accumbens
Scaled Tags Per Million: 12.5
FF:10037-101F1 23-56 years, mixed 12.5
Putamen
Scaled Tags Per Million: 8.2
FF:10176-103C5 60 years, female 8.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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