HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.1 nTPM
HPA:10.1 nTPM
GTEx:36.6 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Mouse:15.6 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041440Antibody HPA043608
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.4
2529 Female, age 94, left hemisphere 10.1
2148 Female, age 91, left hemisphere 10.0
1911 Female, age 85, right hemisphere 9.3
1855 Male, age 76, left hemisphere 9.2
1898 Male, age 80, left hemisphere 9.2
2621 Female, age 67, right hemisphere 8.8
Dentate gyrus
nTPM: 9.9
2528 Male, age 74, both hemispheres 10.9
2531 Female, age 67, both hemispheres 10.4
2246 Female, age 85, both hemispheres 10.2
2530 Female, age 94, left hemisphere 9.7
2010 Male, age 76, both hemispheres 9.4
1927 Female, age 91, both hemispheres 9.0
Entorhinal gyrus
nTPM: 9.2
2686 Male, age 75, right hemisphere 10.0
2117 Female, age 91, right hemisphere 9.7
1787 Male, age 76, left hemisphere 9.6
2764 Male, age 80, right hemisphere 9.5
2613 Female, age 94, left hemisphere 8.6
1938 Female, age 85, left hemisphere 8.0
Hippocampus, CA1
nTPM: 9.9
2082 Female, age 91, right hemisphere 12.7
2527 Male, age 74, both hemispheres 9.9
1873 Female, age 85, both hemispheres 9.7
2045 Male, age 76, both hemispheres 9.3
2749 Male, age 80, left hemisphere 7.8
Hippocampus, CA2
nTPM: 10.1
2249 Male, age 74, both hemispheres 11.2
1940 Female, age 85, left hemisphere 10.6
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 10.0
1963 Male, age 80, left hemisphere 9.9
1892 Male, age 76, both hemispheres 8.5
Hippocampus, CA3
nTPM: 9.4
2620 Female, age 94, left hemisphere 11.0
1891 Female, age 85, both hemispheres 10.1
2861 Female, age 67, both hemispheres 9.8
2436 Male, age 74, both hemispheres 8.8
2137 Male, age 80, left hemisphere 8.5
1867 Male, age 76, both hemispheres 8.2
Parahippocampal cortex
nTPM: 9.3
2692 Male, age 74, both hemispheres 10.5
2622 Female, age 67, right hemisphere 10.1
1990 Female, age 91, right hemisphere 9.7
2018 Male, age 76, both hemispheres 9.3
2250 Female, age 67, right hemisphere 9.2
2532 Female, age 72, left hemisphere 9.1
2693 Female, age 94, both hemispheres 9.0
2245 Female, age 91, both hemispheres 8.9
1933 Female, age 85, both hemispheres 8.5
1850 Male, age 80, both hemispheres 8.3
Perirhinal gyrus
nTPM: 8.4
2848 Male, age 76, right hemisphere 8.9
2521 Female, age 94, right hemisphere 8.7
1841 Female, age 85, right hemisphere 8.5
1847 Female, age 91, left hemisphere 8.0
1794 Male, age 80, right hemisphere 7.9
Subiculum
nTPM: 9.9
2729 Female, age 91, right hemisphere 11.4
2042 Male, age 76, both hemispheres 10.3
2619 Male, age 74, both hemispheres 10.1
1901 Male, age 80, both hemispheres 9.5
2438 Female, age 94, left hemisphere 9.5
1977 Female, age 85, both hemispheres 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.6
Samples: 197

Max nTPM: 96.5
Min nTPM: 13.5
Std nTPM: 12.0
Median nTPM: 34.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 96.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 76.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 72.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 72.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 71.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 63.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 62.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 58.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 58.4
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 58.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 57.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 23.5
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 11.7
Sample A Male 11.7
Sample B Male 13.0
Sample C Female 24.8
Sample D Female 13.0
Hippocampal formation
nTPM: 10.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 7.4
Sample A Male 17.3
Sample B Male 7.4
Sample C Female 9.1
Sample D Female 8.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
70918982 Antisense, RP_050712_04_H07, Mouse strain C57BL/6J (56 days, male) 13.3
68076546 Antisense, RP_040923_02_F07, Mouse strain C57BL/6J (56 days, male) 10.9
Hippocampal formation
Expression energy: 12.1
70918982 Antisense, RP_050712_04_H07, Mouse strain C57BL/6J (56 days, male) 13.3
68076546 Antisense, RP_040923_02_F07, Mouse strain C57BL/6J (56 days, male) 10.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.